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  5. At1g76320

At1g76320


Description : Protein FAR1-RELATED SEQUENCE 4 [Source:UniProtKB/Swiss-Prot;Acc:Q6NQJ7]


Gene families : OG_42_0000075 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g76320
Cluster HCCA clusters: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
Bradi1g24700 No alias FAR1-related sequence 5 0.04 Orthogroups_2024-Update
Bradi2g26120 No alias FAR1-related sequence 5 0.03 Orthogroups_2024-Update
Bradi4g41960 No alias FAR1-related sequence 5 0.04 Orthogroups_2024-Update
Brara.G02019.1 No alias FRS/FRF-type transcription factor 0.03 Orthogroups_2024-Update
Glyma.09G039300 No alias FAR1-related sequence 11 0.03 Orthogroups_2024-Update
Glyma.10G121700 No alias FAR1-related sequence 5 0.03 Orthogroups_2024-Update
LOC_Os08g20486 No alias transposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g12380 No alias transposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
Potri.004G209100 No alias FAR1-related sequence 9 0.04 Orthogroups_2024-Update
Potri.016G007300 No alias FAR1-related sequence 10 0.03 Orthogroups_2024-Update
Seita.9G015500.1 No alias FRS/FRF-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.006G215050.1 No alias FRS/FRF-type transcription factor 0.02 Orthogroups_2024-Update
Solyc01g096850 No alias Protein FAR1-RELATED SEQUENCE 3 (AHRD V3.3 *** A0A0B2S126_GLYSO) 0.03 Orthogroups_2024-Update
Solyc02g068550 No alias FAR1-related sequence 1 (AHRD V3.3 *** AT4G19990.5) 0.03 Orthogroups_2024-Update
Solyc08g060840 No alias FAR1 (AHRD V3.3 *** A0A178UYQ0_ARATH) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006338 chromatin remodeling IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006405 RNA export from nucleus IEP Predicted GO
BP GO:0006406 mRNA export from nucleus IEP Predicted GO
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Predicted GO
BP GO:0006904 vesicle docking involved in exocytosis IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009966 regulation of signal transduction IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
BP GO:0010646 regulation of cell communication IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
BP GO:0016973 poly(A)+ mRNA export from nucleus IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
MF GO:0019899 enzyme binding IEP Predicted GO
BP GO:0022406 membrane docking IEP Predicted GO
BP GO:0023051 regulation of signaling IEP Predicted GO
MF GO:0031491 nucleosome binding IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
BP GO:0032012 regulation of ARF protein signal transduction IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
BP GO:0043044 ATP-dependent chromatin remodeling IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
BP GO:0046578 regulation of Ras protein signal transduction IEP Predicted GO
BP GO:0048278 vesicle docking IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
BP GO:0050657 nucleic acid transport IEP Predicted GO
BP GO:0050658 RNA transport IEP Predicted GO
BP GO:0051028 mRNA transport IEP Predicted GO
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Predicted GO
BP GO:0051168 nuclear export IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
BP GO:0051236 establishment of RNA localization IEP Predicted GO
BP GO:0051640 organelle localization IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
BP GO:0140029 exocytic process IEP Predicted GO
BP GO:0140056 organelle localization by membrane tethering IEP Predicted GO
BP GO:1902531 regulation of intracellular signal transduction IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR004330 FAR1_DNA_bnd_dom 12 97
IPR018289 MULE_transposase_dom 212 304
IPR007527 Znf_SWIM 490 524
No external refs found!