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  5. Brara.B00010.1

Brara.B00010.1


Description : transcriptional co-regulator *(OFP)


Gene families : OG_42_0000150 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000150_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B00010.1
Cluster HCAA Clusters: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
A4A49_12744 No alias transcription repressor ofp4 0.04 Orthogroups_2024-Update
At2g30400 No alias Transcription repressor OFP2... 0.03 Orthogroups_2024-Update
Brara.C02718.1 No alias transcriptional co-regulator *(OFP) 0.04 Orthogroups_2024-Update
GRMZM2G041761 No alias Ovate family protein 0.05 Orthogroups_2024-Update
Glyma.02G235600 No alias ovate family protein 2 0.03 Orthogroups_2024-Update
Glyma.14G203600 No alias ovate family protein 3 0.03 Orthogroups_2024-Update
HORVU1Hr1G076490.1 No alias transcriptional co-regulator *(OFP) 0.04 Orthogroups_2024-Update
HORVU2Hr1G093380.2 No alias transcriptional co-regulator *(OFP) 0.02 Orthogroups_2024-Update
LOC_Os04g48830 No alias DUF623 domain containing protein, expressed 0.03 Orthogroups_2024-Update
Mp3g18940.1 No alias transcription factor (OFP) 0.02 Orthogroups_2024-Update
Pp1s34_338V6 No alias No description available 0.02 Orthogroups_2024-Update
Solyc07g055240 No alias No description available 0.04 Orthogroups_2024-Update
Sopen02g021000 No alias Transcriptional repressor, ovate 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000350 generation of catalytic spliceosome for second transesterification step IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0006497 protein lipidation IEP Predicted GO
BP GO:0006505 GPI anchor metabolic process IEP Predicted GO
BP GO:0006506 GPI anchor biosynthetic process IEP Predicted GO
BP GO:0006643 membrane lipid metabolic process IEP Predicted GO
BP GO:0006644 phospholipid metabolic process IEP Predicted GO
BP GO:0006650 glycerophospholipid metabolic process IEP Predicted GO
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Predicted GO
BP GO:0006664 glycolipid metabolic process IEP Predicted GO
BP GO:0008654 phospholipid biosynthetic process IEP Predicted GO
BP GO:0009247 glycolipid biosynthetic process IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
MF GO:0030570 pectate lyase activity IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
BP GO:0045017 glycerolipid biosynthetic process IEP Predicted GO
BP GO:0046467 membrane lipid biosynthetic process IEP Predicted GO
BP GO:0046474 glycerophospholipid biosynthetic process IEP Predicted GO
BP GO:0046486 glycerolipid metabolic process IEP Predicted GO
BP GO:0046488 phosphatidylinositol metabolic process IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Predicted GO
BP GO:1903509 liposaccharide metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR025830 DNA_bnd_dom_ovate 1 45
IPR006458 Ovate_C 199 255
No external refs found!