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  5. Brara.B00322.1

Brara.B00322.1


Description : peroxisomal NAD-dependent malate dehydrogenase


Gene families : OG_42_0003359 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003359_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B00322.1
Cluster HCAA Clusters: Cluster_271

Target Alias Description ECC score Gene Family Method Actions
Brara.J02369.1 No alias peroxisomal NAD-dependent malate dehydrogenase 0.04 Orthogroups_2024-Update
Glyma.07G185400 No alias peroxisomal NAD-malate dehydrogenase 2 0.03 Orthogroups_2024-Update
Glyma.08G063800 No alias peroxisomal NAD-malate dehydrogenase 2 0.04 Orthogroups_2024-Update
Sopen01g048850 No alias lactate/malate dehydrogenase, alpha/beta C-terminal domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA 16Dec
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
CC GO:0000439 transcription factor TFIIH core complex IEP Predicted GO
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP Predicted GO
CC GO:0005778 peroxisomal membrane IEP Predicted GO
BP GO:0006006 glucose metabolic process IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
BP GO:0009439 cyanate metabolic process IEP Predicted GO
BP GO:0016559 peroxisome fission IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Predicted GO
CC GO:0031903 microbody membrane IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
BP GO:0040008 regulation of growth IEP Predicted GO
CC GO:0042579 microbody IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044438 microbody part IEP Predicted GO
CC GO:0044439 peroxisomal part IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
BP GO:0045927 positive regulation of growth IEP Predicted GO
BP GO:0048285 organelle fission IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR022383 Lactate/malate_DH_C 192 355
IPR001236 Lactate/malate_DH_N 48 190
No external refs found!