1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.B00442.1

Brara.B00442.1


Description : mechanosensitive ion channel *(MSL)


Gene families : OG_42_0000648 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000648_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B00442.1
Cluster HCAA Clusters: Cluster_347

Target Alias Description ECC score Gene Family Method Actions
A4A49_27673 No alias mechanosensitive ion channel protein 10 0.03 Orthogroups_2024-Update
Glyma.20G105400 No alias mechanosensitive channel of small conductance-like 6 0.03 Orthogroups_2024-Update
LOC_Os06g10410 No alias uncharacterized mscS family protein, putative, expressed 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004143 diacylglycerol kinase activity IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
MF GO:0004417 hydroxyethylthiazole kinase activity IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006772 thiamine metabolic process IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009228 thiamine biosynthetic process IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042723 thiamine-containing compound metabolic process IEP Predicted GO
BP GO:0042724 thiamine-containing compound biosynthetic process IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
InterPro domains Description Start Stop
IPR006685 MscS_channel 520 725
No external refs found!