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  5. Brara.B00652.1

Brara.B00652.1


Description : F-type thioredoxin *(Trx-F)


Gene families : OG_42_0005133 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005133_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B00652.1
Cluster HCAA Clusters: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
110708 No alias thioredoxin F2 0.03 Orthogroups_2024-Update
A4A49_03698 No alias thioredoxin f1, chloroplastic 0.05 Orthogroups_2024-Update
Bradi2g58440 No alias thioredoxin F-type 1 0.02 Orthogroups_2024-Update
Cre05.g243050 No alias thioredoxin F-type 1 0.03 Orthogroups_2024-Update
GRMZM2G017419 No alias thioredoxin F2 0.03 Orthogroups_2024-Update
Glyma.18G243200 No alias thioredoxin F2 0.03 Orthogroups_2024-Update
LOC_Os01g68480 No alias thioredoxin, putative, expressed 0.02 Orthogroups_2024-Update
MA_29361g0010 No alias (at5g16400 : 202.0) Encodes an f-type thioredoxin... 0.04 Orthogroups_2024-Update
Pp1s273_45V6 No alias thioredoxin f 0.03 Orthogroups_2024-Update
Seita.9G237000.1 No alias F-type thioredoxin *(Trx-F) 0.03 Orthogroups_2024-Update
Sobic.009G043000.1 No alias F-type thioredoxin *(Trx-F) 0.02 Orthogroups_2024-Update
Solyc05g056300 No alias Thioredoxin (AHRD V3.3 *** A0A103YEZ4_CYNCS) 0.03 Orthogroups_2024-Update
Sopen05g034690 No alias Thioredoxin 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003883 CTP synthase activity IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004176 ATP-dependent peptidase activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
BP GO:0006220 pyrimidine nucleotide metabolic process IEP Predicted GO
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP Predicted GO
BP GO:0006497 protein lipidation IEP Predicted GO
BP GO:0006505 GPI anchor metabolic process IEP Predicted GO
BP GO:0006506 GPI anchor biosynthetic process IEP Predicted GO
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Predicted GO
BP GO:0006664 glycolipid metabolic process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Predicted GO
BP GO:0009247 glycolipid biosynthetic process IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009538 photosystem I reaction center IEP Predicted GO
BP GO:0015977 carbon fixation IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
MF GO:0042623 ATPase activity, coupled IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
BP GO:0046467 membrane lipid biosynthetic process IEP Predicted GO
BP GO:0046474 glycerophospholipid biosynthetic process IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
BP GO:1903509 liposaccharide metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 82 181
No external refs found!