Description : histone *(H2B)
Gene families : OG_42_0000153 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000153_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brassica rapa: Brara.B01057.1 | |
Cluster | HCAA Clusters: Cluster_38 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
426757 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
A4A49_60323 | No alias | putative histone h2b.1 | 0.03 | Orthogroups_2024-Update | |
At2g37470 | No alias | Histone H2B.4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUS0] | 0.08 | Orthogroups_2024-Update | |
At3g09480 | No alias | Histone H2B [Source:UniProtKB/TrEMBL;Acc:A0A178V4X7] | 0.04 | Orthogroups_2024-Update | |
At3g46030 | No alias | Histone H2B [Source:UniProtKB/TrEMBL;Acc:A0A178VGU6] | 0.06 | Orthogroups_2024-Update | |
At5g02570 | No alias | Histone H2B.9 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZ45] | 0.05 | Orthogroups_2024-Update | |
Cre06.g264800 | No alias | Histone superfamily protein | 0.04 | Orthogroups_2024-Update | |
Cre06.g264900 | No alias | Histone superfamily protein | 0.04 | Orthogroups_2024-Update | |
Cre06.g266750 | No alias | Histone superfamily protein | 0.02 | Orthogroups_2024-Update | |
Cre06.g268250 | No alias | Histone superfamily protein | 0.02 | Orthogroups_2024-Update | |
Cre06.g273850 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
Cre06.g274250 | No alias | Histone superfamily protein | 0.04 | Orthogroups_2024-Update | |
Cre06.g274750 | No alias | Histone superfamily protein | 0.04 | Orthogroups_2024-Update | |
Cre06.g276550 | No alias | Histone superfamily protein | 0.01 | Orthogroups_2024-Update | |
Cre06.g276900 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
Cre12.g504550 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
Cre12.g504700 | No alias | Histone superfamily protein | 0.06 | Orthogroups_2024-Update | |
Cre12.g505600 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
Cre12.g506200 | No alias | Histone superfamily protein | 0.05 | Orthogroups_2024-Update | |
Cre13.g570050 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
Cre17.g708600 | No alias | Histone superfamily protein | 0.04 | Orthogroups_2024-Update | |
Cre17.g711750 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
GRMZM2G046841 | No alias | Histone superfamily protein | 0.04 | Orthogroups_2024-Update | |
GRMZM2G141432 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
GRMZM2G305027 | No alias | Histone superfamily protein | 0.04 | Orthogroups_2024-Update | |
GRMZM2G306258 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
GRMZM2G401147 | No alias | Histone superfamily protein | 0.04 | Orthogroups_2024-Update | |
GRMZM2G472696 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.10G198500 | No alias | Histone superfamily protein | 0.06 | Orthogroups_2024-Update | |
Glyma.11G141600 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.11G141800 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.11G142100 | No alias | Histone superfamily protein | 0.05 | Orthogroups_2024-Update | |
Glyma.12G065100 | No alias | Histone superfamily protein | 0.06 | Orthogroups_2024-Update | |
Glyma.12G065200 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.12G065400 | No alias | Histone superfamily protein | 0.04 | Orthogroups_2024-Update | |
Glyma.13G132100 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.13G321600 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.19G173400 | No alias | Histone superfamily protein | 0.05 | Orthogroups_2024-Update | |
Glyma.20G191600 | No alias | Histone superfamily protein | 0.05 | Orthogroups_2024-Update | |
HORVU1Hr1G056530.1 | No alias | histone *(H2B) | 0.03 | Orthogroups_2024-Update | |
HORVU1Hr1G058440.4 | No alias | histone *(H2B) | 0.02 | Orthogroups_2024-Update | |
HORVU1Hr1G066130.1 | No alias | histone *(H2B) | 0.03 | Orthogroups_2024-Update | |
HORVU1Hr1G078480.6 | No alias | histone *(H2B) | 0.04 | Orthogroups_2024-Update | |
HORVU1Hr1G085540.1 | No alias | histone *(H2B) | 0.03 | Orthogroups_2024-Update | |
HORVU3Hr1G013530.1 | No alias | histone *(H2B) | 0.05 | Orthogroups_2024-Update | |
HORVU3Hr1G013680.1 | No alias | histone *(H2B) | 0.03 | Orthogroups_2024-Update | |
HORVU3Hr1G086610.4 | No alias | histone *(H2B) | 0.03 | Orthogroups_2024-Update | |
HORVU4Hr1G009040.2 | No alias | histone *(H2B) | 0.04 | Orthogroups_2024-Update | |
HORVU5Hr1G094500.1 | No alias | histone *(H2B) | 0.03 | Orthogroups_2024-Update | |
HORVU7Hr1G110310.1 | No alias | histone *(H2B) | 0.03 | Orthogroups_2024-Update | |
Kfl01110_0020 | kfl01110_0020_v1.... | (p16868|h2b4_volca : 167.0) Histone H2B.4 (H2B-IV) -... | 0.03 | Orthogroups_2024-Update | |
Mp4g13450.1 | No alias | histone (H2B) | 0.02 | Orthogroups_2024-Update | |
Mp7g05430.1 | No alias | histone (H2B) | 0.02 | Orthogroups_2024-Update | |
PSME_00025825-RA | No alias | (at5g22880 : 173.0) Encodes a histone 2B (H2B) protein.... | 0.04 | Orthogroups_2024-Update | |
Potri.008G029900 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
Seita.2G294900.1 | No alias | histone *(H2B) | 0.03 | Orthogroups_2024-Update | |
Sobic.003G200501.1 | No alias | histone *(H2B) | 0.03 | Orthogroups_2024-Update | |
Solyc02g038690 | No alias | Histone H2B (AHRD V3.3 *** K4B5W3_SOLLC) | 0.07 | Orthogroups_2024-Update | |
Solyc03g071620 | No alias | Histone H2B (AHRD V3.3 *** K4BHJ2_SOLLC) | 0.03 | Orthogroups_2024-Update | |
Solyc05g055440 | No alias | Histone H2B (AHRD V3.3 *** K4C2M0_SOLLC) | 0.07 | Orthogroups_2024-Update | |
Solyc06g005390 | No alias | Histone H2B (AHRD V3.3 *** K4C323_SOLLC) | 0.09 | Orthogroups_2024-Update | |
Solyc06g074780 | No alias | Histone H2B (AHRD V3.3 *** K4C9J5_SOLLC) | 0.07 | Orthogroups_2024-Update | |
Solyc06g074790 | No alias | Histone H2B (AHRD V3.3 *** M1AAN4_SOLTU) | 0.07 | Orthogroups_2024-Update | |
Solyc06g075800 | No alias | Histone H2B (AHRD V3.3 *** K4C9U5_SOLLC) | 0.06 | Orthogroups_2024-Update | |
Solyc11g007920 | No alias | Histone H2B (AHRD V3.3 *** K4D553_SOLLC) | 0.08 | Orthogroups_2024-Update | |
Solyc11g007930 | No alias | Histone H2B (AHRD V3.3 *** K4D554_SOLLC) | 0.06 | Orthogroups_2024-Update | |
Solyc11g066430 | No alias | histone H2B | 0.07 | Orthogroups_2024-Update | |
Sopen03g019890 | No alias | Core histone H2A/H2B/H3/H4 | 0.04 | Orthogroups_2024-Update | |
Sopen05g033890 | No alias | Core histone H2A/H2B/H3/H4 | 0.06 | Orthogroups_2024-Update | |
Sopen06g031230 | No alias | Core histone H2A/H2B/H3/H4 | 0.07 | Orthogroups_2024-Update | |
Sopen06g032230 | No alias | Core histone H2A/H2B/H3/H4 | 0.05 | Orthogroups_2024-Update | |
Sopen11g003790 | No alias | Core histone H2A/H2B/H3/H4 | 0.04 | Orthogroups_2024-Update | |
Sopen11g003800 | No alias | Core histone H2A/H2B/H3/H4 | 0.07 | Orthogroups_2024-Update | |
Sopen11g026180 | No alias | Core histone H2A/H2B/H3/H4 | 0.07 | Orthogroups_2024-Update | |
Sopen12g006850 | No alias | Core histone H2A/H2B/H3/H4 | 0.05 | Orthogroups_2024-Update | |
evm.model.tig00000944.18 | No alias | (p16868|h2b4_volca : 122.0) Histone H2B.4 (H2B-IV) -... | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | 16Dec |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000105 | histidine biosynthetic process | IEP | Predicted GO |
CC | GO:0000151 | ubiquitin ligase complex | IEP | Predicted GO |
CC | GO:0000152 | nuclear ubiquitin ligase complex | IEP | Predicted GO |
BP | GO:0000724 | double-strand break repair via homologous recombination | IEP | Predicted GO |
BP | GO:0000725 | recombinational repair | IEP | Predicted GO |
MF | GO:0003697 | single-stranded DNA binding | IEP | Predicted GO |
MF | GO:0003735 | structural constituent of ribosome | IEP | Predicted GO |
MF | GO:0003916 | DNA topoisomerase activity | IEP | Predicted GO |
MF | GO:0003918 | DNA topoisomerase type II (ATP-hydrolyzing) activity | IEP | Predicted GO |
MF | GO:0004109 | coproporphyrinogen oxidase activity | IEP | Predicted GO |
MF | GO:0005198 | structural molecule activity | IEP | Predicted GO |
CC | GO:0005680 | anaphase-promoting complex | IEP | Predicted GO |
CC | GO:0005840 | ribosome | IEP | Predicted GO |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0006259 | DNA metabolic process | IEP | Predicted GO |
BP | GO:0006265 | DNA topological change | IEP | Predicted GO |
BP | GO:0006270 | DNA replication initiation | IEP | Predicted GO |
BP | GO:0006302 | double-strand break repair | IEP | Predicted GO |
BP | GO:0006310 | DNA recombination | IEP | Predicted GO |
BP | GO:0006412 | translation | IEP | Predicted GO |
BP | GO:0006518 | peptide metabolic process | IEP | Predicted GO |
BP | GO:0006547 | histidine metabolic process | IEP | Predicted GO |
BP | GO:0006606 | protein import into nucleus | IEP | Predicted GO |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Predicted GO |
BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | Predicted GO |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | Predicted GO |
BP | GO:0006913 | nucleocytoplasmic transport | IEP | Predicted GO |
BP | GO:0006950 | response to stress | IEP | Predicted GO |
BP | GO:0007088 | regulation of mitotic nuclear division | IEP | Predicted GO |
BP | GO:0007346 | regulation of mitotic cell cycle | IEP | Predicted GO |
MF | GO:0008094 | DNA-dependent ATPase activity | IEP | Predicted GO |
BP | GO:0008152 | metabolic process | IEP | Predicted GO |
BP | GO:0009058 | biosynthetic process | IEP | Predicted GO |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | Predicted GO |
BP | GO:0009987 | cellular process | IEP | Predicted GO |
BP | GO:0010564 | regulation of cell cycle process | IEP | Predicted GO |
BP | GO:0010965 | regulation of mitotic sister chromatid separation | IEP | Predicted GO |
MF | GO:0016634 | oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor | IEP | Predicted GO |
MF | GO:0016853 | isomerase activity | IEP | Predicted GO |
BP | GO:0017038 | protein import | IEP | Predicted GO |
BP | GO:0030071 | regulation of mitotic metaphase/anaphase transition | IEP | Predicted GO |
CC | GO:0031461 | cullin-RING ubiquitin ligase complex | IEP | Predicted GO |
CC | GO:0032991 | protein-containing complex | IEP | Predicted GO |
BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | Predicted GO |
BP | GO:0033043 | regulation of organelle organization | IEP | Predicted GO |
BP | GO:0033044 | regulation of chromosome organization | IEP | Predicted GO |
BP | GO:0033045 | regulation of sister chromatid segregation | IEP | Predicted GO |
BP | GO:0033047 | regulation of mitotic sister chromatid segregation | IEP | Predicted GO |
BP | GO:0034504 | protein localization to nucleus | IEP | Predicted GO |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Predicted GO |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Predicted GO |
BP | GO:0043043 | peptide biosynthetic process | IEP | Predicted GO |
BP | GO:0043170 | macromolecule metabolic process | IEP | Predicted GO |
CC | GO:0043226 | organelle | IEP | Predicted GO |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | Predicted GO |
CC | GO:0043229 | intracellular organelle | IEP | Predicted GO |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Predicted GO |
BP | GO:0043603 | cellular amide metabolic process | IEP | Predicted GO |
BP | GO:0043604 | amide biosynthetic process | IEP | Predicted GO |
BP | GO:0044237 | cellular metabolic process | IEP | Predicted GO |
BP | GO:0044238 | primary metabolic process | IEP | Predicted GO |
BP | GO:0044249 | cellular biosynthetic process | IEP | Predicted GO |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Predicted GO |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Predicted GO |
CC | GO:0044424 | intracellular part | IEP | Predicted GO |
CC | GO:0044444 | cytoplasmic part | IEP | Predicted GO |
CC | GO:0044464 | cell part | IEP | Predicted GO |
BP | GO:0046483 | heterocycle metabolic process | IEP | Predicted GO |
BP | GO:0051128 | regulation of cellular component organization | IEP | Predicted GO |
BP | GO:0051169 | nuclear transport | IEP | Predicted GO |
BP | GO:0051170 | import into nucleus | IEP | Predicted GO |
BP | GO:0051783 | regulation of nuclear division | IEP | Predicted GO |
BP | GO:0051983 | regulation of chromosome segregation | IEP | Predicted GO |
BP | GO:0052803 | imidazole-containing compound metabolic process | IEP | Predicted GO |
MF | GO:0061505 | DNA topoisomerase II activity | IEP | Predicted GO |
MF | GO:0061608 | nuclear import signal receptor activity | IEP | Predicted GO |
BP | GO:0071704 | organic substance metabolic process | IEP | Predicted GO |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Predicted GO |
MF | GO:0140104 | molecular carrier activity | IEP | Predicted GO |
MF | GO:0140142 | nucleocytoplasmic carrier activity | IEP | Predicted GO |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Predicted GO |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Predicted GO |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Predicted GO |
BP | GO:1901576 | organic substance biosynthetic process | IEP | Predicted GO |
BP | GO:1901987 | regulation of cell cycle phase transition | IEP | Predicted GO |
BP | GO:1901990 | regulation of mitotic cell cycle phase transition | IEP | Predicted GO |
BP | GO:1902099 | regulation of metaphase/anaphase transition of cell cycle | IEP | Predicted GO |
BP | GO:1905818 | regulation of chromosome separation | IEP | Predicted GO |
CC | GO:1990904 | ribonucleoprotein complex | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR007125 | Histone_H2A/H2B/H3 | 4 | 118 |
No external refs found! |