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  5. Brara.B01807.1

Brara.B01807.1


Description : adaptor component *(ClpS) of chloroplast Clp-type protease complex


Gene families : OG_42_0004685 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004685_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B01807.1
Cluster HCAA Clusters: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
69252 No alias Ribosomal protein L12/ ATP-dependent Clp protease... 0.03 Orthogroups_2024-Update
Bradi3g36600 No alias Ribosomal protein L12/ ATP-dependent Clp protease... 0.02 Orthogroups_2024-Update
Cre17.g696400 No alias Ribosomal protein L12/ ATP-dependent Clp protease... 0.02 Orthogroups_2024-Update
LOC_Os08g33540 No alias ATP-dependent Clp protease adaptor protein ClpS... 0.06 Orthogroups_2024-Update
Pp1s40_52V6 No alias atp-dependent clp protease adaptor protein containing protein 0.03 Orthogroups_2024-Update
Seita.6G157200.1 No alias adaptor component *(ClpS) of chloroplast Clp-type... 0.03 Orthogroups_2024-Update
Sobic.007G135800.1 No alias adaptor component *(ClpS) of chloroplast Clp-type... 0.06 Orthogroups_2024-Update
Solyc03g119700 No alias ATP-dependent Clp protease adaptor protein ClpS (AHRD... 0.07 Orthogroups_2024-Update
Sopen03g038530 No alias ATP-dependent Clp protease adaptor protein ClpS 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0030163 protein catabolic process IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Predicted GO
BP GO:0005986 sucrose biosynthetic process IEP Predicted GO
BP GO:0006353 DNA-templated transcription, termination IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006817 phosphate ion transport IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0008883 glutamyl-tRNA reductase activity IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0010109 regulation of photosynthesis IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
MF GO:0010242 oxygen evolving activity IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0019203 carbohydrate phosphatase activity IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0042548 regulation of photosynthesis, light reaction IEP Predicted GO
BP GO:0042549 photosystem II stabilization IEP Predicted GO
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Predicted GO
MF GO:0050307 sucrose-phosphate phosphatase activity IEP Predicted GO
MF GO:0050308 sugar-phosphatase activity IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR003769 ClpS_core 77 143
No external refs found!