Brara.B01966.1

Description : class-B endo-1,4-beta-glucanase

Gene families : OG_42_0000077 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000077_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.B01966.1
Cluster	HCAA Clusters: Cluster_204

Target	Alias	Description	ECC score	Gene Family Method
85183	No alias	glycosyl hydrolase 9A4	0.02	Orthogroups_2024-Update
A4A49_13767	No alias	endoglucanase 17	0.03	Orthogroups_2024-Update
Glyma.04G111300	No alias	cellulase 3	0.03	Orthogroups_2024-Update
PSME_00008851-RA	No alias	(at1g64390 : 781.0) glycosyl hydrolase 9C2 (GH9C2);...	0.04	Orthogroups_2024-Update
Sopen11g018340	No alias	Glycosyl hydrolase family 9	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEA	16Dec
BP	GO:0005975	carbohydrate metabolic process	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004592	pantoate-beta-alanine ligase activity	IEP	Predicted GO
BP	GO:0006575	cellular modified amino acid metabolic process	IEP	Predicted GO
BP	GO:0006766	vitamin metabolic process	IEP	Predicted GO
BP	GO:0006767	water-soluble vitamin metabolic process	IEP	Predicted GO
BP	GO:0009110	vitamin biosynthetic process	IEP	Predicted GO
BP	GO:0015939	pantothenate metabolic process	IEP	Predicted GO
BP	GO:0015940	pantothenate biosynthetic process	IEP	Predicted GO
MF	GO:0016881	acid-amino acid ligase activity	IEP	Predicted GO
BP	GO:0040008	regulation of growth	IEP	Predicted GO
BP	GO:0042364	water-soluble vitamin biosynthetic process	IEP	Predicted GO
BP	GO:0042398	cellular modified amino acid biosynthetic process	IEP	Predicted GO
BP	GO:0045927	positive regulation of growth	IEP	Predicted GO
BP	GO:0048518	positive regulation of biological process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001701	Glyco_hydro_9	25	473

External Links

No external refs found!