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  5. Brara.B03253.1

Brara.B03253.1


Description : substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)


Gene families : OG_42_0000339 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000339_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Brassica rapa: Brara.B03253.1
Cluster HCAA Clusters: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
A4A49_27088 No alias protein transport inhibitor response 1 0.02 Orthogroups_2024-Update
At3g26810 No alias AFB2 [Source:UniProtKB/TrEMBL;Acc:A0A178VGF7] 0.03 Orthogroups_2024-Update
Bradi3g58320 No alias RNI-like superfamily protein 0.02 Orthogroups_2024-Update
Brara.I00210.1 No alias substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB) 0.02 Orthogroups_2024-Update
GRMZM2G135978 No alias F-box/RNI-like superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os02g52230 No alias coronatine-insensitive protein 1, putative, expressed 0.02 Orthogroups_2024-Update
Potri.014G134800 No alias F-box/RNI-like superfamily protein 0.03 Orthogroups_2024-Update
Pp1s196_87V6 No alias f-box family protein 0.02 Orthogroups_2024-Update
Solyc09g074520 No alias Transport inhibitor response 1 (AHRD V3.3 *** C7E4R3_TOBAC) 0.03 Orthogroups_2024-Update
Sopen02g023990 No alias Leucine Rich repeat 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000439 transcription factor TFIIH core complex IEP Predicted GO
BP GO:0006012 galactose metabolic process IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
MF GO:0008108 UDP-glucose:hexose-1-phosphate uridylyltransferase activity IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
BP GO:0040008 regulation of growth IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
BP GO:0045927 positive regulation of growth IEP Predicted GO
MF GO:0070569 uridylyltransferase activity IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!