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  5. Brara.B03462.1

Brara.B03462.1


Description : C2H2 subclass ZFP transcription factor


Gene families : OG_42_0000024 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000024_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B03462.1
Cluster HCAA Clusters: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
At1g13400 No alias Zinc finger protein JAGGED-like... 0.02 Orthogroups_2024-Update
At5g57520 No alias Zinc finger protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39261] 0.03 Orthogroups_2024-Update
Bradi1g76570 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Orthogroups_2024-Update
Brara.B02398.1 No alias C2H2 subclass ZFP transcription factor 0.04 Orthogroups_2024-Update
Brara.C02141.1 No alias C2H2 subclass ZFP transcription factor 0.03 Orthogroups_2024-Update
Brara.D02576.1 No alias C2H2 subclass ZFP transcription factor 0.03 Orthogroups_2024-Update
Brara.E00257.1 No alias C2H2 subclass ZFP transcription factor 0.03 Orthogroups_2024-Update
Brara.F02973.1 No alias C2H2 subclass ZFP transcription factor 0.03 Orthogroups_2024-Update
Brara.G03704.1 No alias C2H2 subclass ZFP transcription factor 0.03 Orthogroups_2024-Update
Glyma.17G216800 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os12g39220 No alias ZOS12-08 - C2H2 zinc finger protein, expressed 0.03 Orthogroups_2024-Update
Seita.2G305800.1 No alias C2H2 subclass ZFP transcription factor 0.02 Orthogroups_2024-Update
Seita.2G375500.1 No alias C2H2 subclass ZFP transcription factor 0.03 Orthogroups_2024-Update
Solyc05g009170 No alias Zinc finger family protein (AHRD V3.3 *** B9HWF8_POPTR) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
MF GO:0005375 copper ion transmembrane transporter activity IEP Predicted GO
CC GO:0005787 signal peptidase complex IEP Predicted GO
BP GO:0006465 signal peptide processing IEP Predicted GO
BP GO:0006825 copper ion transport IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
BP GO:0035434 copper ion transmembrane transport IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
CC GO:1905368 peptidase complex IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!