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  5. Brara.B03742.1

Brara.B03742.1


Description : TCP-type transcription factor


Gene families : OG_42_0000203 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000203_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B03742.1
Cluster HCAA Clusters: Cluster_217

Target Alias Description ECC score Gene Family Method Actions
At2g31070 No alias Transcription factor TCP10... 0.03 Orthogroups_2024-Update
GRMZM2G458087 No alias J-domain protein 6 0.02 Orthogroups_2024-Update
Glyma.04G161400 No alias TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 0.03 Orthogroups_2024-Update
LOC_Os09g24480 No alias TCP family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
Potri.012G059900 No alias TCP family transcription factor 0.03 Orthogroups_2024-Update
Potri.015G050500 No alias TCP family transcription factor 0.02 Orthogroups_2024-Update
Seita.5G327600.1 No alias TCP-type transcription factor 0.04 Orthogroups_2024-Update
Solyc04g006980 No alias TCP transcription factor 22 0.03 Orthogroups_2024-Update
Sopen08g015840 No alias TCP family transcription factor 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0003972 RNA ligase (ATP) activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Predicted GO
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP Predicted GO
BP GO:0006465 signal peptide processing IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0008452 RNA ligase activity IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 62 194
No external refs found!