Brara.B03997.1

Description : component *(PsbO/OEC33) of PS-II oxygen-evolving center

Gene families : OG_42_0003125 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003125_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.B03997.1
Cluster	HCAA Clusters: Cluster_9

Target	Alias	Description	ECC score	Gene Family Method
449377	No alias	photosystem II subunit O-2	0.01	Orthogroups_2024-Update
A4A49_07505	No alias	oxygen-evolving enhancer protein 1, chloroplastic	0.12	Orthogroups_2024-Update
A4A49_26169	No alias	oxygen-evolving enhancer protein 1, chloroplastic	0.14	Orthogroups_2024-Update
A4A49_35879	No alias	oxygen-evolving enhancer protein 1, chloroplastic	0.1	Orthogroups_2024-Update
At3g50820	No alias	Oxygen-evolving enhancer protein 1-2, chloroplastic...	0.04	Orthogroups_2024-Update
At5g66570	No alias	Oxygen-evolving enhancer protein 1-1, chloroplastic...	0.07	Orthogroups_2024-Update
Bradi1g56580	No alias	photosystem II subunit O-2	0.09	Orthogroups_2024-Update
Brara.A02119.1	No alias	component *(PsbO/OEC33) of PS-II oxygen-evolving center	0.03	Orthogroups_2024-Update
Cre09.g396213	No alias	PS II oxygen-evolving complex 1	0.09	Orthogroups_2024-Update
Glyma.01G180800	No alias	photosystem II subunit O-2	0.07	Orthogroups_2024-Update
Glyma.02G061100	No alias	photosystem II subunit O-2	0.12	Orthogroups_2024-Update
Glyma.11G061300	No alias	PS II oxygen-evolving complex 1	0.07	Orthogroups_2024-Update
Glyma.16G143600	No alias	photosystem II subunit O-2	0.09	Orthogroups_2024-Update
HORVU2Hr1G057700.2	No alias	component *(PsbO/OEC33) of PS-II oxygen-evolving center	0.05	Orthogroups_2024-Update
Kfl00614_0030	kfl00614_0030_v1.1	(q40459\|psbo_tobac : 405.0) Oxygen-evolving enhancer...	0.1	Orthogroups_2024-Update
MA_491379g0010	No alias	(q40459\|psbo_tobac : 419.0) Oxygen-evolving enhancer...	0.05	Orthogroups_2024-Update
Mp6g15300.1	No alias	component PsbO/OEC33 of PS-II oxygen-evolving center	0.03	Orthogroups_2024-Update
Pp1s25_66V6	No alias	oxygen-evolving enhancer protein 1	0.16	Orthogroups_2024-Update
Pp1s306_84V6	No alias	oxygen-evolving enhancer protein 1	0.11	Orthogroups_2024-Update
Pp1s421_3V6	No alias	oxygen-evolving enhancer protein 1	0.04	Orthogroups_2024-Update
Pp1s60_65V6	No alias	oxygen-evolving enhancer protein 1	0.19	Orthogroups_2024-Update
Seita.5G172700.1	No alias	component *(PsbO/OEC33) of PS-II oxygen-evolving center	0.11	Orthogroups_2024-Update
Sobic.010G241000.1	No alias	component *(PsbO/OEC33) of PS-II oxygen-evolving center	0.13	Orthogroups_2024-Update
Solyc02g065400	No alias	33kDa precursor protein of oxygen-evolving complex	0.15	Orthogroups_2024-Update
Solyc02g090030	No alias	No description available	0.12	Orthogroups_2024-Update
Sopen02g015600	No alias	Manganese-stabilising protein / photosystem II polypeptide	0.04	Orthogroups_2024-Update
Sopen02g034730	No alias	Manganese-stabilising protein / photosystem II polypeptide	0.16	Orthogroups_2024-Update
evm.model.contig_2663.4	No alias	(p14226\|psbo_pea : 251.0) Oxygen-evolving enhancer...	0.01	Orthogroups_2024-Update
evm.model.tig00020911.43	No alias	(p14226\|psbo_pea : 106.0) Oxygen-evolving enhancer...	0.04	Orthogroups_2024-Update
evm.model.tig00020944.21	No alias	(p12359\|psbo_spiol : 228.0) Oxygen-evolving enhancer...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0008150	biological_process	None	Extended
CC	GO:0009654	photosystem II oxygen evolving complex	IEA	16Dec
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010109	regulation of photosynthesis	None	Extended
BP	GO:0010207	photosystem II assembly	IEA	16Dec
MF	GO:0010242	oxygen evolving activity	IEA	16Dec
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034622	cellular protein-containing complex assembly	None	Extended
BP	GO:0042548	regulation of photosynthesis, light reaction	None	Extended
BP	GO:0042549	photosystem II stabilization	IEA	16Dec
BP	GO:0043467	regulation of generation of precursor metabolites and energy	None	Extended
BP	GO:0043933	protein-containing complex subunit organization	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044425	membrane part	None	Extended
CC	GO:0044436	thylakoid part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990204	oxidoreductase complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004359	glutaminase activity	IEP	Predicted GO
MF	GO:0005509	calcium ion binding	IEP	Predicted GO
BP	GO:0006081	cellular aldehyde metabolic process	IEP	Predicted GO
BP	GO:0006766	vitamin metabolic process	IEP	Predicted GO
BP	GO:0006767	water-soluble vitamin metabolic process	IEP	Predicted GO
BP	GO:0008152	metabolic process	IEP	Predicted GO
BP	GO:0009110	vitamin biosynthetic process	IEP	Predicted GO
CC	GO:0009507	chloroplast	IEP	Predicted GO
CC	GO:0009521	photosystem	IEP	Predicted GO
CC	GO:0009522	photosystem I	IEP	Predicted GO
CC	GO:0009523	photosystem II	IEP	Predicted GO
CC	GO:0009536	plastid	IEP	Predicted GO
CC	GO:0009538	photosystem I reaction center	IEP	Predicted GO
BP	GO:0015979	photosynthesis	IEP	Predicted GO
MF	GO:0016811	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	IEP	Predicted GO
MF	GO:0016854	racemase and epimerase activity	IEP	Predicted GO
MF	GO:0016857	racemase and epimerase activity, acting on carbohydrates and derivatives	IEP	Predicted GO
CC	GO:0019898	extrinsic component of membrane	IEP	Predicted GO
MF	GO:0030145	manganese ion binding	IEP	Predicted GO
BP	GO:0042364	water-soluble vitamin biosynthetic process	IEP	Predicted GO
BP	GO:0042816	vitamin B6 metabolic process	IEP	Predicted GO
BP	GO:0042819	vitamin B6 biosynthetic process	IEP	Predicted GO
BP	GO:0042822	pyridoxal phosphate metabolic process	IEP	Predicted GO
BP	GO:0042823	pyridoxal phosphate biosynthetic process	IEP	Predicted GO
BP	GO:0044237	cellular metabolic process	IEP	Predicted GO
BP	GO:0046184	aldehyde biosynthetic process	IEP	Predicted GO
BP	GO:1901617	organic hydroxy compound biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002628	PSII_MSP	99	331

External Links

No external refs found!

Brara.B03997.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation