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  5. Brara.C00053.1

Brara.C00053.1


Description : Unknown function


Gene families : OG_42_0001442 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001442_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C00053.1
Cluster HCAA Clusters: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
At2g39795 No alias Uncharacterized protein At2g39795, mitochondrial... 0.04 Orthogroups_2024-Update
At5g02050 No alias At5g02050 [Source:UniProtKB/TrEMBL;Acc:Q9LZM6] 0.05 Orthogroups_2024-Update
Bradi1g42640 No alias Mitochondrial glycoprotein family protein 0.05 Orthogroups_2024-Update
Bradi2g02870 No alias Mitochondrial glycoprotein family protein 0.08 Orthogroups_2024-Update
Bradi2g02890 No alias Mitochondrial glycoprotein family protein 0.08 Orthogroups_2024-Update
Cre04.g225600 No alias Mitochondrial glycoprotein family protein 0.02 Orthogroups_2024-Update
GRMZM2G011213 No alias Mitochondrial glycoprotein family protein 0.04 Orthogroups_2024-Update
Glyma.02G251000 No alias Mitochondrial glycoprotein family protein 0.03 Orthogroups_2024-Update
Glyma.18G187800 No alias Mitochondrial glycoprotein family protein 0.04 Orthogroups_2024-Update
HORVU0Hr1G006190.2 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU3Hr1G011460.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU7Hr1G046980.1 No alias Unknown function 0.11 Orthogroups_2024-Update
Kfl00154_0170 kfl00154_0170_v1.1 no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
LOC_Os05g38210 No alias mitochondrial glycoprotein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os06g22070 No alias mitochondrial glycoprotein, putative, expressed 0.05 Orthogroups_2024-Update
PSME_00000622-RA No alias (at5g02050 : 166.0) Mitochondrial glycoprotein family... 0.06 Orthogroups_2024-Update
PSME_00025182-RA No alias (at2g39795 : 140.0) Mitochondrial glycoprotein family... 0.03 Orthogroups_2024-Update
Potri.006G090700 No alias Mitochondrial glycoprotein family protein 0.05 Orthogroups_2024-Update
Potri.010G198600 No alias Mitochondrial glycoprotein family protein 0.07 Orthogroups_2024-Update
Pp1s118_113V6 No alias contains ESTs AU108164(C53469),C27934(C53469) similar to... 0.04 Orthogroups_2024-Update
Seita.3G220000.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.4G141500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.5G099100.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Seita.5G099200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.003G075200.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Sobic.010G134100.1 No alias Unknown function 0.09 Orthogroups_2024-Update
Solyc03g079930 No alias Mitochondrial glycoprotein (AHRD V3.3 *** A0A103YDB4_CYNCS) 0.05 Orthogroups_2024-Update
Sopen03g027200 No alias Mitochondrial glycoprotein 0.13 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005759 mitochondrial matrix IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEP Predicted GO
MF GO:0003922 GMP synthase (glutamine-hydrolyzing) activity IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005730 nucleolus IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006177 GMP biosynthetic process IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
MF GO:0008094 DNA-dependent ATPase activity IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0009119 ribonucleoside metabolic process IEP Predicted GO
BP GO:0009163 nucleoside biosynthetic process IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0016597 amino acid binding IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Predicted GO
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
CC GO:0030126 COPI vesicle coat IEP Predicted GO
MF GO:0031406 carboxylic acid binding IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0042255 ribosome assembly IEP Predicted GO
BP GO:0042256 mature ribosome assembly IEP Predicted GO
BP GO:0042278 purine nucleoside metabolic process IEP Predicted GO
BP GO:0042451 purine nucleoside biosynthetic process IEP Predicted GO
BP GO:0042455 ribonucleoside biosynthetic process IEP Predicted GO
MF GO:0043021 ribonucleoprotein complex binding IEP Predicted GO
MF GO:0043022 ribosome binding IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
MF GO:0043177 organic acid binding IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
BP GO:0046037 GMP metabolic process IEP Predicted GO
BP GO:0046128 purine ribonucleoside metabolic process IEP Predicted GO
BP GO:0046129 purine ribonucleoside biosynthetic process IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
MF GO:0061505 DNA topoisomerase II activity IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
BP GO:1901068 guanosine-containing compound metabolic process IEP Predicted GO
BP GO:1901070 guanosine-containing compound biosynthetic process IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
BP GO:1901659 glycosyl compound biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR003428 MAM33 72 257
No external refs found!