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  5. Brara.C00504.1

Brara.C00504.1


Description : mechanosensitive ion channel *(MSL)


Gene families : OG_42_0000648 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000648_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C00504.1
Cluster HCAA Clusters: Cluster_218

Target Alias Description ECC score Gene Family Method Actions
Brara.C03539.1 No alias mechanosensitive ion channel *(MSL) 0.03 Orthogroups_2024-Update
Glyma.06G055400 No alias mechanosensitive channel of small conductance-like 10 0.03 Orthogroups_2024-Update
Glyma.15G175800 No alias mechanosensitive channel of small conductance-like 10 0.03 Orthogroups_2024-Update
Glyma.20G105400 No alias mechanosensitive channel of small conductance-like 6 0.03 Orthogroups_2024-Update
HORVU5Hr1G048820.2 No alias mechanosensitive ion channel *(MSL) 0.03 Orthogroups_2024-Update
HORVU6Hr1G014650.4 No alias mechanosensitive ion channel *(MSL) 0.02 Orthogroups_2024-Update
HORVU7Hr1G034680.2 No alias mechanosensitive ion channel *(MSL) 0.03 Orthogroups_2024-Update
Sobic.010G077300.1 No alias mechanosensitive ion channel *(MSL) 0.03 Orthogroups_2024-Update
Solyc12g094420 No alias Mechanosensitive ion channel family protein (AHRD V3.3... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP Predicted GO
BP GO:0002376 immune system process IEP Predicted GO
BP GO:0006955 immune response IEP Predicted GO
BP GO:0009452 7-methylguanosine RNA capping IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0036260 RNA capping IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
BP GO:0045087 innate immune response IEP Predicted GO
BP GO:0071586 CAAX-box protein processing IEP Predicted GO
InterPro domains Description Start Stop
IPR006685 MscS_channel 507 712
No external refs found!