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  5. Brara.C00700.1

Brara.C00700.1


Description : S-adenosyl methionine decarboxylase & EC_4.1 carbon-carbon lyase


Gene families : OG_42_0001259 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001259_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C00700.1
Cluster HCAA Clusters: Cluster_182

Target Alias Description ECC score Gene Family Method Actions
Glyma.02G128000 No alias Adenosylmethionine decarboxylase family protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G086140.5 No alias S-adenosyl methionine decarboxylase & EC_4.1 carbon-carbon lyase 0.02 Orthogroups_2024-Update
LOC_Os04g42095 No alias S-adenosyl-l-methionine decarboxylase leader peptide,... 0.03 Orthogroups_2024-Update
MA_75633g0020 No alias (q96471|dcam_iponi : 422.0) S-adenosylmethionine... 0.03 Orthogroups_2024-Update
PSME_00055926-RA No alias (at5g15950 : 174.0) Adenosylmethionine decarboxylase... 0.02 Orthogroups_2024-Update
Potri.018G101500 No alias S-adenosylmethionine decarboxylase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004014 adenosylmethionine decarboxylase activity IEA 16Dec
BP GO:0006597 spermine biosynthetic process IEA 16Dec
BP GO:0008295 spermidine biosynthetic process IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0006465 signal peptide processing IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
InterPro domains Description Start Stop
IPR001985 S-AdoMet_decarboxylase 6 330
No external refs found!