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  5. Brara.C00948.1

Brara.C00948.1


Description : auxiliary co-chaperone involved in RuBisCo assembly *(CPN20) & Hsp60-co-chaperone *(Hsp20)


Gene families : OG_42_0002026 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002026_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C00948.1
Cluster HCAA Clusters: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
Bradi1g46596 No alias chaperonin 20 0.04 Orthogroups_2024-Update
Bradi3g60027 No alias chaperonin 20 0.09 Orthogroups_2024-Update
Cre08.g358562 No alias chaperonin 20 0.08 Orthogroups_2024-Update
Cre12.g505850 No alias chaperonin 20 0.09 Orthogroups_2024-Update
GRMZM2G091189 No alias chaperonin 20 0.06 Orthogroups_2024-Update
GRMZM2G399284 No alias chaperonin 20 0.02 Orthogroups_2024-Update
Glyma.09G072100 No alias chaperonin 20 0.03 Orthogroups_2024-Update
Glyma.13G112500 No alias chaperonin 20 0.05 Orthogroups_2024-Update
Glyma.17G047200 No alias chaperonin 20 0.06 Orthogroups_2024-Update
HORVU5Hr1G062310.1 No alias auxiliary co-chaperone involved in RuBisCo assembly... 0.04 Orthogroups_2024-Update
HORVU7Hr1G033900.2 No alias auxiliary co-chaperone involved in RuBisCo assembly... 0.11 Orthogroups_2024-Update
Kfl00475_0020 kfl00475_0020_v1.1 (at5g20720 : 271.0) Encodes a chloroplast co-chaperonin... 0.06 Orthogroups_2024-Update
Mp1g10690.1 No alias CPN20 auxiliary co-chaperone involved in RuBisCo... 0.02 Orthogroups_2024-Update
PSME_00032906-RA No alias (at5g20720 : 291.0) Encodes a chloroplast co-chaperonin... 0.04 Orthogroups_2024-Update
PSME_00043293-RA No alias (at5g20720 : 111.0) Encodes a chloroplast co-chaperonin... 0.03 Orthogroups_2024-Update
Potri.006G138600 No alias chaperonin 20 0.03 Orthogroups_2024-Update
Potri.018G063200 No alias chaperonin 20 0.06 Orthogroups_2024-Update
Seita.1G341200.1 No alias Hsp60-co-chaperone *(Hsp20) & auxiliary co-chaperone... 0.06 Orthogroups_2024-Update
Seita.2G217300.1 No alias Hsp60-co-chaperone *(Hsp20) & auxiliary co-chaperone... 0.02 Orthogroups_2024-Update
Seita.4G040000.1 No alias Hsp60-co-chaperone *(Hsp20) & auxiliary co-chaperone... 0.04 Orthogroups_2024-Update
Sobic.002G214600.1 No alias Hsp60-co-chaperone *(Hsp20) & auxiliary co-chaperone... 0.03 Orthogroups_2024-Update
Sobic.010G073700.1 No alias Hsp60-co-chaperone *(Hsp20) & auxiliary co-chaperone... 0.03 Orthogroups_2024-Update
Solyc07g042250 No alias chaperonin 21 precursor 0.03 Orthogroups_2024-Update
Solyc12g009250 No alias Chaperonin (AHRD V3.3 *** Q69QD5_ORYSJ) 0.05 Orthogroups_2024-Update
Sopen12g004200 No alias Chaperonin 10 Kd subunit 0.04 Orthogroups_2024-Update
Sopen12g004210 No alias Chaperonin 10 Kd subunit 0.06 Orthogroups_2024-Update
evm.model.contig_2299.2 No alias (q02073|ch10c_spiol : 112.0) 20 kDa chaperonin,... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
BP GO:0006457 protein folding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Predicted GO
MF GO:0004109 coproporphyrinogen oxidase activity IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0004749 ribose phosphate diphosphokinase activity IEP Predicted GO
MF GO:0004784 superoxide dismutase activity IEP Predicted GO
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Predicted GO
MF GO:0004820 glycine-tRNA ligase activity IEP Predicted GO
MF GO:0004832 valine-tRNA ligase activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005737 cytoplasm IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006418 tRNA aminoacylation for protein translation IEP Predicted GO
BP GO:0006426 glycyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006438 valyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006520 cellular amino acid metabolic process IEP Predicted GO
BP GO:0006612 protein targeting to membrane IEP Predicted GO
BP GO:0006613 cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0006753 nucleoside phosphate metabolic process IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006771 riboflavin metabolic process IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
BP GO:0006801 superoxide metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009117 nucleotide metabolic process IEP Predicted GO
BP GO:0009165 nucleotide biosynthetic process IEP Predicted GO
BP GO:0009231 riboflavin biosynthetic process IEP Predicted GO
BP GO:0009262 deoxyribonucleotide metabolic process IEP Predicted GO
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Predicted GO
CC GO:0009349 riboflavin synthase complex IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Predicted GO
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0016778 diphosphotransferase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Predicted GO
BP GO:0018130 heterocycle biosynthetic process IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042726 flavin-containing compound metabolic process IEP Predicted GO
BP GO:0042727 flavin-containing compound biosynthetic process IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
BP GO:0043038 amino acid activation IEP Predicted GO
BP GO:0043039 tRNA aminoacylation IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0045047 protein targeting to ER IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
BP GO:0072593 reactive oxygen species metabolic process IEP Predicted GO
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072657 protein localization to membrane IEP Predicted GO
BP GO:0090150 establishment of protein localization to membrane IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
MF GO:0140101 catalytic activity, acting on a tRNA IEP Predicted GO
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR020818 Chaperonin_GroES 170 214
IPR020818 Chaperonin_GroES 62 151
No external refs found!