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  5. Brara.C01339.1

Brara.C01339.1


Description : transcriptional regulator *(PRI1) of transient metal homeostasis & bHLH-type transcription factor


Gene families : OG_42_0001057 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001057_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C01339.1
Cluster HCAA Clusters: Cluster_353

Target Alias Description ECC score Gene Family Method Actions
At1g51070 No alias Basic helix-loop-helix (BHLH) DNA-binding superfamily... 0.03 Orthogroups_2024-Update
HORVU1Hr1G072810.2 No alias transcriptional regulator *(PRI1) of transient metal... 0.03 Orthogroups_2024-Update
HORVU6Hr1G009220.1 No alias transcriptional regulator *(PRI1) of transient metal... 0.02 Orthogroups_2024-Update
Potri.004G031800 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.011G031000 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006771 riboflavin metabolic process IEP Predicted GO
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009231 riboflavin biosynthetic process IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042726 flavin-containing compound metabolic process IEP Predicted GO
BP GO:0042727 flavin-containing compound biosynthetic process IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR011598 bHLH_dom 78 125
No external refs found!