Brara.C01589.1


Description : Unknown function


Gene families : OG_42_0000861 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000861_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C01589.1
Cluster HCAA Clusters: Cluster_155

Target Alias Description ECC score Gene Family Method Actions
At2g42570 No alias Protein trichome birefringence-like 39... 0.03 Orthogroups_2024-Update
Glyma.06G283800 No alias TRICHOME BIREFRINGENCE-LIKE 39 0.02 Orthogroups_2024-Update
Glyma.11G081700 No alias TRICHOME BIREFRINGENCE-LIKE 38 0.02 Orthogroups_2024-Update
Glyma.13G230800 No alias TRICHOME BIREFRINGENCE-LIKE 38 0.03 Orthogroups_2024-Update
Sopen02g022010 No alias GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016740 transferase activity IEA 16Dec
Type GO Term Name Evidence Source
MF GO:0001671 ATPase activator activity IEP Predicted GO
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
CC GO:0072546 ER membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR025846 PMR5_N_dom 45 96
IPR026057 PC-Esterase 98 361
No external refs found!