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  5. Brara.C03356.1

Brara.C03356.1


Description : delta-12/delta-15 fatty acid desaturase


Gene families : OG_42_0001432 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001432_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C03356.1
Cluster HCAA Clusters: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
103593 No alias fatty acid desaturase 7 0.02 Orthogroups_2024-Update
Cre01.g038600 No alias fatty acid desaturase 7 0.02 Orthogroups_2024-Update
Glyma.01G120400 No alias fatty acid desaturase 8 0.03 Orthogroups_2024-Update
Glyma.02G227200 No alias fatty acid desaturase 8 0.03 Orthogroups_2024-Update
Glyma.03G056700 No alias fatty acid desaturase 8 0.05 Orthogroups_2024-Update
HORVU4Hr1G056470.12 No alias delta-12/delta-15 fatty acid desaturase 0.04 Orthogroups_2024-Update
Pp1s65_6V6 No alias chloroplast omega-3 fatty acid desaturase 0.02 Orthogroups_2024-Update
Pp1s98_209V6 No alias chloroplast omega-3 fatty acid desaturase 0.02 Orthogroups_2024-Update
Sobic.005G002700.1 No alias delta-12/delta-15 fatty acid desaturase 0.03 Orthogroups_2024-Update
Sopen06g017370 No alias Domain of unknown function (DUF3474) 0.04 Orthogroups_2024-Update
evm.model.tig00021281.40 No alias (p48621|fad3c_soybn : 202.0) Omega-3 fatty acid... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA 16Dec
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0004594 pantothenate kinase activity IEP Predicted GO
CC GO:0005778 peroxisomal membrane IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006771 riboflavin metabolic process IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0009231 riboflavin biosynthetic process IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
BP GO:0015937 coenzyme A biosynthetic process IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
BP GO:0016559 peroxisome fission IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
CC GO:0031903 microbody membrane IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042726 flavin-containing compound metabolic process IEP Predicted GO
BP GO:0042727 flavin-containing compound biosynthetic process IEP Predicted GO
CC GO:0044438 microbody part IEP Predicted GO
CC GO:0044439 peroxisomal part IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0048285 organelle fission IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR021863 FAS_N 1 119
IPR005804 FA_desaturase_dom 126 381
No external refs found!