1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.C03613.1

Brara.C03613.1


Description : transcriptional repressor *(IAA/AUX)


Gene families : OG_42_0000083 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C03613.1
Cluster HCAA Clusters: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
85035 No alias indole-3-acetic acid inducible 9 0.03 Orthogroups_2024-Update
A4A49_27411 No alias auxin-induced protein 22d 0.05 Orthogroups_2024-Update
A4A49_37462 No alias auxin-responsive protein iaa7 0.06 Orthogroups_2024-Update
At2g33310 No alias Auxin-responsive protein IAA13... 0.03 Orthogroups_2024-Update
Bradi2g05650 No alias phytochrome-associated protein 1 0.02 Orthogroups_2024-Update
Brara.H01453.1 No alias transcriptional repressor *(IAA/AUX) 0.03 Orthogroups_2024-Update
GRMZM2G115357 No alias AUX/IAA transcriptional regulator family protein 0.03 Orthogroups_2024-Update
Glyma.13G354100 No alias phytochrome-associated protein 1 0.03 Orthogroups_2024-Update
Glyma.14G185400 No alias indole-3-acetic acid inducible 9 0.03 Orthogroups_2024-Update
HORVU6Hr1G091260.4 No alias transcriptional repressor *(IAA/AUX) 0.03 Orthogroups_2024-Update
LOC_Os01g08320 No alias OsIAA1 - Auxin-responsive Aux/IAA gene family member, expressed 0.03 Orthogroups_2024-Update
LOC_Os01g48444 No alias OsIAA5 - Auxin-responsive Aux/IAA gene family member, expressed 0.02 Orthogroups_2024-Update
LOC_Os01g53880 No alias OsIAA6 - Auxin-responsive Aux/IAA gene family member, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g09480 No alias OsIAA16 - Auxin-responsive Aux/IAA gene family member, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g39590 No alias OsIAA23 - Auxin-responsive Aux/IAA gene family member, expressed 0.03 Orthogroups_2024-Update
MA_62134g0010 No alias (p0c132|iaa30_orysa : 182.0) Auxin-responsive protein... 0.03 Orthogroups_2024-Update
PSME_00022723-RA No alias (p0c132|iaa30_orysa : 223.0) Auxin-responsive protein... 0.02 Orthogroups_2024-Update
Potri.001G186100 No alias phytochrome-associated protein 2 0.03 Orthogroups_2024-Update
Potri.001G190300 No alias phytochrome-associated protein 1 0.04 Orthogroups_2024-Update
Potri.008G161100 No alias AUX/IAA transcriptional regulator family protein 0.03 Orthogroups_2024-Update
Seita.3G109400.1 No alias transcriptional repressor *(IAA/AUX) 0.03 Orthogroups_2024-Update
Seita.5G134600.1 No alias transcriptional repressor *(IAA/AUX) 0.04 Orthogroups_2024-Update
Solyc06g084070 No alias auxin-regulated IAA2 0.04 Orthogroups_2024-Update
Sopen03g039290 No alias AUX/IAA family 0.03 Orthogroups_2024-Update
Sopen03g039380 No alias AUX/IAA family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR033389 AUX/IAA_dom 39 257
No external refs found!