Brara.C03763.1

Description : RING-H2-class BTL-subclass E3 ubiquitin ligase

Gene families : OG_42_0000043 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000043_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.C03763.1
Cluster	HCAA Clusters: Cluster_137

Target	Alias	Description	ECC score	Gene Family Method
Bradi3g34010	No alias	RING/U-box superfamily protein	0.03	Orthogroups_2024-Update
Bradi4g31645	No alias	RING-H2 finger C1A	0.04	Orthogroups_2024-Update
Brara.C02094.1	No alias	RING-H2-class BTL-subclass E3 ubiquitin ligase	0.05	Orthogroups_2024-Update
Brara.H02157.1	No alias	E3 ubiquitin ligase *(SNIPER)	0.04	Orthogroups_2024-Update
GRMZM2G157855	No alias	RING/U-box superfamily protein	0.03	Orthogroups_2024-Update
Glyma.10G244900	No alias	RING/U-box superfamily protein	0.03	Orthogroups_2024-Update
HORVU5Hr1G051760.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
HORVU7Hr1G043120.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
LOC_Os11g02670	No alias	zinc finger, C3HC4 type domain containing protein, expressed	0.02	Orthogroups_2024-Update
Seita.4G001100.1	No alias	RING-H2-class BTL-subclass E3 ubiquitin ligase	0.03	Orthogroups_2024-Update
Seita.7G303700.1	No alias	gibberellin modification enzyme *(ELA) & EC_1.14...	0.03	Orthogroups_2024-Update
Sopen05g003750	No alias	Ring finger domain	0.03	Orthogroups_2024-Update
Sopen05g014700	No alias	Ring finger domain	0.03	Orthogroups_2024-Update
evm.model.contig_4448.17	No alias	(at3g19950 : 129.0) RING/U-box superfamily protein;...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
MF	GO:0061630	ubiquitin protein ligase activity	IEA	16Dec
MF	GO:0061659	ubiquitin-like protein ligase activity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR039525	RNF126-like_zinc-ribbon	16	50
IPR001841	Znf_RING	190	233

External Links

No external refs found!