Brara.C04547.1

Description : component *(eL15) of large ribosomal-subunit (LSU) proteome

Gene families : OG_42_0002052 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002052_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.C04547.1
Cluster	HCAA Clusters: Cluster_8

Target	Alias	Description	ECC score	Gene Family Method
270259	No alias	Ribosomal protein L23/L15e family protein	0.1	Orthogroups_2024-Update
A4A49_58101	No alias	60s ribosomal protein l15-1	0.11	Orthogroups_2024-Update
At4g16720	No alias	Ribosomal protein L15 [Source:UniProtKB/TrEMBL;Acc:A0A178V5T1]	0.05	Orthogroups_2024-Update
Bradi1g27332	No alias	Ribosomal protein L23/L15e family protein	0.16	Orthogroups_2024-Update
Bradi3g23072	No alias	Ribosomal protein L23/L15e family protein	0.08	Orthogroups_2024-Update
Brara.A01864.1	No alias	component *(eL15) of large ribosomal-subunit (LSU) proteome	0.16	Orthogroups_2024-Update
Brara.C04524.1	No alias	component *(eL15) of large ribosomal-subunit (LSU) proteome	0.11	Orthogroups_2024-Update
Brara.H00875.1	No alias	component *(eL15) of large ribosomal-subunit (LSU) proteome	0.17	Orthogroups_2024-Update
Brara.H00923.1	No alias	component *(eL15) of large ribosomal-subunit (LSU) proteome	0.16	Orthogroups_2024-Update
Cre02.g091100	No alias	Ribosomal protein L23/L15e family protein	0.19	Orthogroups_2024-Update
GRMZM2G024354	No alias	Ribosomal protein L23/L15e family protein	0.03	Orthogroups_2024-Update
Glyma.01G207700	No alias	Ribosomal protein L23/L15e family protein	0.13	Orthogroups_2024-Update
Glyma.05G061400	No alias	Ribosomal protein L23/L15e family protein	0.12	Orthogroups_2024-Update
Glyma.11G034700	No alias	Ribosomal protein L23/L15e family protein	0.1	Orthogroups_2024-Update
Glyma.17G143200	No alias	Ribosomal protein L23/L15e family protein	0.12	Orthogroups_2024-Update
HORVU2Hr1G052650.1	No alias	component *(eL15) of large ribosomal-subunit (LSU) proteome	0.11	Orthogroups_2024-Update
HORVU5Hr1G048830.1	No alias	component *(eL15) of large ribosomal-subunit (LSU) proteome	0.11	Orthogroups_2024-Update
Kfl00064_0230	kfl00064_0230_v1.1	(at4g16720 : 296.0) Ribosomal protein L23/L15e family...	0.03	Orthogroups_2024-Update
LOC_Os03g40180	No alias	60S ribosomal protein L15, putative, expressed	0.04	Orthogroups_2024-Update
LOC_Os05g19370	No alias	60S ribosomal protein L15, putative, expressed	0.03	Orthogroups_2024-Update
MA_19619g0010	No alias	(o82528\|rl15_pethy : 332.0) 60S ribosomal protein L15 -...	0.09	Orthogroups_2024-Update
Mp1g06500.1	No alias	component RPL15 of LSU proteome component	0.12	Orthogroups_2024-Update
Potri.003G078700	No alias	Ribosomal protein L23/L15e family protein	0.07	Orthogroups_2024-Update
Pp1s134_151V6	No alias	FCAALL.416; 60S ribosomal protein L15 (RPL15A)...	0.1	Orthogroups_2024-Update
Pp1s152_141V6	No alias	60S ribosomal protein L15-1 [Picea mariana]	0.12	Orthogroups_2024-Update
Pp1s28_15V6	No alias	60S ribosomal protein L15-1 [Picea mariana]	0.03	Orthogroups_2024-Update
Pp1s34_445V6	No alias	60S ribosomal protein L15-1 [Picea mariana]	0.08	Orthogroups_2024-Update
Pp1s7_364V6	No alias	FCAALL.416; 60S ribosomal protein L15 (RPL15A)...	0.05	Orthogroups_2024-Update
Seita.2G046800.1	No alias	component *(eL15) of large ribosomal-subunit (LSU) proteome	0.19	Orthogroups_2024-Update
Seita.2G317300.1	No alias	component *(eL15) of large ribosomal-subunit (LSU) proteome	0.12	Orthogroups_2024-Update
Sobic.002G047600.1	No alias	component *(eL15) of large ribosomal-subunit (LSU) proteome	0.14	Orthogroups_2024-Update
Sobic.002G304900.1	No alias	component *(eL15) of large ribosomal-subunit (LSU) proteome	0.2	Orthogroups_2024-Update
Solyc04g008460	No alias	SET-domain containing protein lysine methyltransferase...	0.21	Orthogroups_2024-Update
Solyc06g060400	No alias	Ribosomal protein L15 (AHRD V3.3 *** K4C6M0_SOLLC)	0.21	Orthogroups_2024-Update
Solyc06g064630	No alias	Ribosomal protein L15 (AHRD V3.3 *** K4C793_SOLLC)	0.08	Orthogroups_2024-Update
Sopen04g003610	No alias	Ribosomal L15	0.09	Orthogroups_2024-Update
Sopen06g020540	No alias	Ribosomal L15	0.14	Orthogroups_2024-Update
Sopen06g023110	No alias	Ribosomal L15	0.26	Orthogroups_2024-Update
evm.model.contig_2025.57	No alias	(at4g16720 : 267.0) Ribosomal protein L23/L15e family...	0.2	Orthogroups_2024-Update
evm.model.tig00000310.75	No alias	(at4g16720 : 256.0) Ribosomal protein L23/L15e family...	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	16Dec
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	16Dec
BP	GO:0006412	translation	IEA	16Dec
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000105	histidine biosynthetic process	IEP	Predicted GO
CC	GO:0000276	mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)	IEP	Predicted GO
MF	GO:0003950	NAD+ ADP-ribosyltransferase activity	IEP	Predicted GO
MF	GO:0004635	phosphoribosyl-AMP cyclohydrolase activity	IEP	Predicted GO
BP	GO:0006547	histidine metabolic process	IEP	Predicted GO
BP	GO:0006553	lysine metabolic process	IEP	Predicted GO
BP	GO:0006694	steroid biosynthetic process	IEP	Predicted GO
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	Predicted GO
MF	GO:0008017	microtubule binding	IEP	Predicted GO
BP	GO:0008202	steroid metabolic process	IEP	Predicted GO
BP	GO:0008652	cellular amino acid biosynthetic process	IEP	Predicted GO
MF	GO:0008839	4-hydroxy-tetrahydrodipicolinate reductase	IEP	Predicted GO
BP	GO:0009066	aspartate family amino acid metabolic process	IEP	Predicted GO
BP	GO:0009067	aspartate family amino acid biosynthetic process	IEP	Predicted GO
BP	GO:0009085	lysine biosynthetic process	IEP	Predicted GO
BP	GO:0009089	lysine biosynthetic process via diaminopimelate	IEP	Predicted GO
BP	GO:0009117	nucleotide metabolic process	IEP	Predicted GO
BP	GO:0009165	nucleotide biosynthetic process	IEP	Predicted GO
BP	GO:0009262	deoxyribonucleotide metabolic process	IEP	Predicted GO
BP	GO:0009263	deoxyribonucleotide biosynthetic process	IEP	Predicted GO
MF	GO:0015631	tubulin binding	IEP	Predicted GO
CC	GO:0015934	large ribosomal subunit	IEP	Predicted GO
MF	GO:0016628	oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	IEP	Predicted GO
MF	GO:0016763	transferase activity, transferring pentosyl groups	IEP	Predicted GO
MF	GO:0016814	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines	IEP	Predicted GO
BP	GO:0018130	heterocycle biosynthetic process	IEP	Predicted GO
MF	GO:0019238	cyclohydrolase activity	IEP	Predicted GO
BP	GO:0019438	aromatic compound biosynthetic process	IEP	Predicted GO
MF	GO:0035596	methylthiotransferase activity	IEP	Predicted GO
BP	GO:0043648	dicarboxylic acid metabolic process	IEP	Predicted GO
BP	GO:0044281	small molecule metabolic process	IEP	Predicted GO
CC	GO:0044391	ribosomal subunit	IEP	Predicted GO
CC	GO:0045263	proton-transporting ATP synthase complex, coupling factor F(o)	IEP	Predicted GO
BP	GO:0046451	diaminopimelate metabolic process	IEP	Predicted GO
MF	GO:0050497	transferase activity, transferring alkylthio groups	IEP	Predicted GO
MF	GO:0051539	4 iron, 4 sulfur cluster binding	IEP	Predicted GO
BP	GO:0052803	imidazole-containing compound metabolic process	IEP	Predicted GO
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	Predicted GO
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	Predicted GO
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	Predicted GO
BP	GO:1901605	alpha-amino acid metabolic process	IEP	Predicted GO
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000439	Ribosomal_L15e	9	197

External Links

No external refs found!

Brara.C04547.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation