1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.D00322.1

Brara.D00322.1


Description : Unknown function


Gene families : OG_42_0000041 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000041_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.D00322.1
Cluster HCAA Clusters: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
Bradi1g62660 No alias Heavy metal transport/detoxification superfamily protein 0.03 Orthogroups_2024-Update
Bradi2g01800 No alias Heavy metal transport/detoxification superfamily protein 0.05 Orthogroups_2024-Update
Bradi3g40160 No alias Heavy metal transport/detoxification superfamily protein 0.03 Orthogroups_2024-Update
Brara.G01018.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Glyma.01G141700 No alias Heavy metal transport/detoxification superfamily protein 0.03 Orthogroups_2024-Update
Glyma.05G119300 No alias Chloroplast-targeted copper chaperone protein 0.03 Orthogroups_2024-Update
Glyma.09G045200 No alias Heavy metal transport/detoxification superfamily protein 0.03 Orthogroups_2024-Update
MA_2930g0010 No alias (at4g39700 : 176.0) Heavy metal transport/detoxification... 0.03 Orthogroups_2024-Update
MA_9120066g0010 No alias (at3g56891 : 105.0) Heavy metal transport/detoxification... 0.04 Orthogroups_2024-Update
MA_927203g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00018078-RA No alias (at4g39700 : 206.0) Heavy metal transport/detoxification... 0.02 Orthogroups_2024-Update
PSME_00035558-RA No alias (at4g39700 : 119.0) Heavy metal transport/detoxification... 0.03 Orthogroups_2024-Update
Potri.004G091700 No alias Heavy metal transport/detoxification superfamily protein 0.03 Orthogroups_2024-Update
Potri.008G023800 No alias homolog of anti-oxidant 1 0.03 Orthogroups_2024-Update
Seita.2G187200.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc03g025790 No alias Heavy metal transport/detoxification superfamily protein... 0.05 Orthogroups_2024-Update
Sopen03g004600 No alias Heavy-metal-associated domain 0.03 Orthogroups_2024-Update
Sopen05g033750 No alias Heavy-metal-associated domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
BP GO:0006465 signal peptide processing IEP Predicted GO
BP GO:0006605 protein targeting IEP Predicted GO
BP GO:0006612 protein targeting to membrane IEP Predicted GO
BP GO:0006613 cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0033365 protein localization to organelle IEP Predicted GO
BP GO:0034613 cellular protein localization IEP Predicted GO
BP GO:0045047 protein targeting to ER IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
BP GO:0070727 cellular macromolecule localization IEP Predicted GO
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072594 establishment of protein localization to organelle IEP Predicted GO
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072657 protein localization to membrane IEP Predicted GO
BP GO:0090150 establishment of protein localization to membrane IEP Predicted GO
InterPro domains Description Start Stop
IPR006121 HMA_dom 22 74
No external refs found!