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Description : Rab GTPase-activating protein
Gene families : OG_42_0002162 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002162_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa: Brara.D00700.1 | |
| Cluster | HCAA Clusters: Cluster_36 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| At1g04830 | No alias | Ypt/Rab-GAP domain of gyp1p superfamily protein... | 0.04 | Orthogroups_2024-Update | |
| Glyma.11G255600 | No alias | Ypt/Rab-GAP domain of gyp1p superfamily protein | 0.04 | Orthogroups_2024-Update | |
| LOC_Os11g28990 | No alias | TBC domain containing protein, expressed | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000160 | phosphorelay signal transduction system | IEP | Predicted GO |
| BP | GO:0000381 | regulation of alternative mRNA splicing, via spliceosome | IEP | Predicted GO |
| MF | GO:0003873 | 6-phosphofructo-2-kinase activity | IEP | Predicted GO |
| MF | GO:0004420 | hydroxymethylglutaryl-CoA reductase (NADPH) activity | IEP | Predicted GO |
| MF | GO:0005048 | signal sequence binding | IEP | Predicted GO |
| BP | GO:0006000 | fructose metabolic process | IEP | Predicted GO |
| BP | GO:0006476 | protein deacetylation | IEP | Predicted GO |
| BP | GO:0006621 | protein retention in ER lumen | IEP | Predicted GO |
| MF | GO:0008443 | phosphofructokinase activity | IEP | Predicted GO |
| BP | GO:0015936 | coenzyme A metabolic process | IEP | Predicted GO |
| BP | GO:0016567 | protein ubiquitination | IEP | Predicted GO |
| BP | GO:0016575 | histone deacetylation | IEP | Predicted GO |
| CC | GO:0016592 | mediator complex | IEP | Predicted GO |
| MF | GO:0019200 | carbohydrate kinase activity | IEP | Predicted GO |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | Predicted GO |
| BP | GO:0032507 | maintenance of protein location in cell | IEP | Predicted GO |
| BP | GO:0033865 | nucleoside bisphosphate metabolic process | IEP | Predicted GO |
| BP | GO:0033875 | ribonucleoside bisphosphate metabolic process | IEP | Predicted GO |
| BP | GO:0034032 | purine nucleoside bisphosphate metabolic process | IEP | Predicted GO |
| BP | GO:0035437 | maintenance of protein localization in endoplasmic reticulum | IEP | Predicted GO |
| BP | GO:0035556 | intracellular signal transduction | IEP | Predicted GO |
| BP | GO:0035601 | protein deacylation | IEP | Predicted GO |
| MF | GO:0042277 | peptide binding | IEP | Predicted GO |
| BP | GO:0043484 | regulation of RNA splicing | IEP | Predicted GO |
| BP | GO:0045185 | maintenance of protein location | IEP | Predicted GO |
| MF | GO:0046923 | ER retention sequence binding | IEP | Predicted GO |
| BP | GO:0048024 | regulation of mRNA splicing, via spliceosome | IEP | Predicted GO |
| BP | GO:0050684 | regulation of mRNA processing | IEP | Predicted GO |
| BP | GO:0051651 | maintenance of location in cell | IEP | Predicted GO |
| BP | GO:0072595 | maintenance of protein localization in organelle | IEP | Predicted GO |
| BP | GO:0098732 | macromolecule deacylation | IEP | Predicted GO |
| BP | GO:1903311 | regulation of mRNA metabolic process | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000195 | Rab-GTPase-TBC_dom | 222 | 412 |
| No external refs found! |