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  5. Brara.D01142.1

Brara.D01142.1


Description : CMF transcription factor


Gene families : OG_42_0000610 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000610_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.D01142.1
Cluster HCAA Clusters: Cluster_200

Target Alias Description ECC score Gene Family Method Actions
A4A49_06344 No alias hypothetical protein 0.05 Orthogroups_2024-Update
At2g33350 No alias CCT motif family protein [Source:TAIR;Acc:AT2G33350] 0.03 Orthogroups_2024-Update
At3g12890 No alias ASML2 [Source:UniProtKB/TrEMBL;Acc:A0A178V7S7] 0.03 Orthogroups_2024-Update
Bradi4g45330 No alias CCT motif family protein 0.02 Orthogroups_2024-Update
Brara.D02027.1 No alias CMF transcription factor 0.04 Orthogroups_2024-Update
Glyma.01G221100 No alias CCT motif family protein 0.03 Orthogroups_2024-Update
HORVU4Hr1G084020.9 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os03g04620 No alias CCT motif family protein, expressed 0.03 Orthogroups_2024-Update
PSME_00044402-RA No alias (at5g41380 : 107.0) CCT motif family protein; CONTAINS... 0.05 Orthogroups_2024-Update
Potri.001G136700 No alias activator of spomin::LUC2 0.03 Orthogroups_2024-Update
Potri.003G130500 No alias CCT motif family protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Predicted GO
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
MF GO:0004417 hydroxyethylthiazole kinase activity IEP Predicted GO
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006772 thiamine metabolic process IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009228 thiamine biosynthetic process IEP Predicted GO
BP GO:0032200 telomere organization IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
BP GO:0042723 thiamine-containing compound metabolic process IEP Predicted GO
BP GO:0042724 thiamine-containing compound biosynthetic process IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
BP GO:0060249 anatomical structure homeostasis IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
MF GO:0070403 NAD+ binding IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO
InterPro domains Description Start Stop
IPR010402 CCT_domain 214 256
No external refs found!