Brara.D02284.1


Description : histone *(H4)


Gene families : OG_42_0000156 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000156_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.D02284.1
Cluster HCAA Clusters: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
A4A49_58366 No alias histone h4 0.03 Orthogroups_2024-Update
A4A49_59902 No alias histone h4 0.06 Orthogroups_2024-Update
A4A49_60016 No alias histone h4 0.03 Orthogroups_2024-Update
AC196961.2_FG003 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
AC212565.3_FG001 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
AC233865.1_FG001 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
At1g07820 No alias Histone H4 [Source:UniProtKB/TrEMBL;Acc:A0A178VF54] 0.04 Orthogroups_2024-Update
At2g28740 No alias Histone H4 [Source:UniProtKB/TrEMBL;Acc:A0A178VF54] 0.04 Orthogroups_2024-Update
At3g53730 No alias Histone H4 [Source:UniProtKB/TrEMBL;Acc:A0A178VF54] 0.05 Orthogroups_2024-Update
At5g59690 No alias Histone H4 [Source:UniProtKB/TrEMBL;Acc:A0A178VF54] 0.03 Orthogroups_2024-Update
Cre06.g264600 No alias histone H4 0.01 Orthogroups_2024-Update
Cre06.g265050 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Cre06.g265200 No alias histone H4 0.03 Orthogroups_2024-Update
Cre06.g265450 No alias histone H4 0.01 Orthogroups_2024-Update
Cre06.g268000 No alias histone H4 0.01 Orthogroups_2024-Update
Cre06.g268400 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Cre06.g271300 No alias histone H4 0.03 Orthogroups_2024-Update
Cre06.g274150 No alias histone H4 0.01 Orthogroups_2024-Update
Cre06.g274300 No alias histone H4 0.03 Orthogroups_2024-Update
Cre06.g274900 No alias histone H4 0.04 Orthogroups_2024-Update
Cre06.g275700 No alias histone H4 0.04 Orthogroups_2024-Update
Cre06.g276650 No alias histone H4 0.03 Orthogroups_2024-Update
Cre12.g504600 No alias histone H4 0.01 Orthogroups_2024-Update
Cre12.g504850 No alias histone H4 0.03 Orthogroups_2024-Update
Cre12.g505450 No alias Histone superfamily protein 0.01 Orthogroups_2024-Update
Cre12.g506450 No alias Histone superfamily protein 0.01 Orthogroups_2024-Update
Cre17.g708650 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre17.g709100 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G084195 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G143780 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G149178 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
GRMZM2G421279 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.02G224100 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Glyma.11G146481 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Glyma.11G177800 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Glyma.11G177900 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.11G178200 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.12G074500 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.13G147000 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.14G190800 No alias Histone superfamily protein 0.05 Orthogroups_2024-Update
Glyma.15G043200 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.17G063200 No alias histone H4 0.04 Orthogroups_2024-Update
Glyma.18G064300 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.18G064401 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Glyma.20G083800 No alias histone H4 0.03 Orthogroups_2024-Update
HORVU1Hr1G022390.2 No alias histone *(H4) 0.03 Orthogroups_2024-Update
HORVU1Hr1G029090.2 No alias histone *(H4) 0.02 Orthogroups_2024-Update
HORVU1Hr1G090300.47 No alias histone *(H4) 0.02 Orthogroups_2024-Update
HORVU3Hr1G088160.1 No alias histone *(H4) 0.04 Orthogroups_2024-Update
HORVU5Hr1G087830.1 No alias histone *(H4) 0.03 Orthogroups_2024-Update
HORVU6Hr1G011510.1 No alias histone *(H4) 0.02 Orthogroups_2024-Update
Kfl00106_g14 kfl00106_g14_v1.1 (at5g59970 : 160.0) Histone superfamily protein;... 0.02 Orthogroups_2024-Update
Kfl00240_g19 kfl00240_g19_v1.1 (at5g59970 : 160.0) Histone superfamily protein;... 0.03 Orthogroups_2024-Update
Kfl00394_0030 kfl00394_0030_v1.1 (at5g59970 : 160.0) Histone superfamily protein;... 0.02 Orthogroups_2024-Update
MA_7644388g0010 No alias (at5g59970 : 168.0) Histone superfamily protein;... 0.02 Orthogroups_2024-Update
MA_97951g0010 No alias (at5g59970 : 160.0) Histone superfamily protein;... 0.03 Orthogroups_2024-Update
Mp4g03080.1 No alias histone (H4) 0.03 Orthogroups_2024-Update
Mp4g03090.1 No alias histone (H4) 0.04 Orthogroups_2024-Update
Mp4g13440.1 No alias histone (H4) 0.02 Orthogroups_2024-Update
Mp5g22460.1 No alias histone (H4) 0.03 Orthogroups_2024-Update
Mp5g22470.1 No alias histone (H4) 0.03 Orthogroups_2024-Update
Pp1s197_4V6 No alias histone h4 0.02 Orthogroups_2024-Update
Pp1s2_218V6 No alias histone h4 0.02 Orthogroups_2024-Update
Pp1s378_30V6 No alias histone h4 0.02 Orthogroups_2024-Update
Seita.6G125400.1 No alias histone *(H4) 0.03 Orthogroups_2024-Update
Seita.7G212600.1 No alias histone *(H4) 0.06 Orthogroups_2024-Update
Solyc04g011390 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.06 Orthogroups_2024-Update
Solyc05g054610 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.06 Orthogroups_2024-Update
Solyc06g005420 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.03 Orthogroups_2024-Update
Solyc06g005430 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.08 Orthogroups_2024-Update
Solyc06g075830 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.06 Orthogroups_2024-Update
Solyc06g075850 No alias No description available 0.07 Orthogroups_2024-Update
Solyc06g075930 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.08 Orthogroups_2024-Update
Solyc06g075960 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.07 Orthogroups_2024-Update
Solyc11g066160 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.08 Orthogroups_2024-Update
Solyc11g072840 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.06 Orthogroups_2024-Update
Solyc11g072860 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.07 Orthogroups_2024-Update
Sopen04g005580 No alias Core histone H2A/H2B/H3/H4 0.04 Orthogroups_2024-Update
Sopen05g033090 No alias Core histone H2A/H2B/H3/H4 0.03 Orthogroups_2024-Update
Sopen06g001390 No alias Core histone H2A/H2B/H3/H4 0.02 Orthogroups_2024-Update
Sopen06g001400 No alias Core histone H2A/H2B/H3/H4 0.03 Orthogroups_2024-Update
Sopen06g032260 No alias Core histone H2A/H2B/H3/H4 0.06 Orthogroups_2024-Update
Sopen06g032280 No alias Core histone H2A/H2B/H3/H4 0.1 Orthogroups_2024-Update
Sopen06g032360 No alias Core histone H2A/H2B/H3/H4 0.05 Orthogroups_2024-Update
Sopen06g032380 No alias Core histone H2A/H2B/H3/H4 0.03 Orthogroups_2024-Update
Sopen11g025930 No alias Core histone H2A/H2B/H3/H4 0.03 Orthogroups_2024-Update
Sopen11g030510 No alias Core histone H2A/H2B/H3/H4 0.07 Orthogroups_2024-Update
Sopen11g030530 No alias Core histone H2A/H2B/H3/H4 0.08 Orthogroups_2024-Update
evm.model.contig_2255.1 No alias (at5g59970 : 154.0) Histone superfamily protein;... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Predicted GO
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
BP GO:0001932 regulation of protein phosphorylation IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEP Predicted GO
MF GO:0004590 orotidine-5'-phosphate decarboxylase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Predicted GO
BP GO:0006206 pyrimidine nucleobase metabolic process IEP Predicted GO
BP GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006270 DNA replication initiation IEP Predicted GO
MF GO:0008094 DNA-dependent ATPase activity IEP Predicted GO
BP GO:0009112 nucleobase metabolic process IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
BP GO:0019856 pyrimidine nucleobase biosynthetic process IEP Predicted GO
MF GO:0019900 kinase binding IEP Predicted GO
MF GO:0019901 protein kinase binding IEP Predicted GO
CC GO:0030118 clathrin coat IEP Predicted GO
CC GO:0030125 clathrin vesicle coat IEP Predicted GO
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Predicted GO
CC GO:0030132 clathrin coat of coated pit IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0042325 regulation of phosphorylation IEP Predicted GO
BP GO:0043549 regulation of kinase activity IEP Predicted GO
BP GO:0045859 regulation of protein kinase activity IEP Predicted GO
BP GO:0046112 nucleobase biosynthetic process IEP Predicted GO
BP GO:0051338 regulation of transferase activity IEP Predicted GO
MF GO:0061505 DNA topoisomerase II activity IEP Predicted GO
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR035425 CENP-T/H4_C 39 96
No external refs found!