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Description : AS2/LOB-type transcription factor
Gene families : OG_42_0000073 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000073_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa: Brara.D02463.1 | |
| Cluster | HCAA Clusters: Cluster_70 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_10474 | No alias | lob domain-containing protein 25 | 0.03 | Orthogroups_2024-Update | |
| A4A49_25203 | No alias | lob domain-containing protein 11 | 0.03 | Orthogroups_2024-Update | |
| Brara.G01383.1 | No alias | AS2/LOB-type transcription factor | 0.05 | Orthogroups_2024-Update | |
| Brara.I00725.1 | No alias | AS2/LOB-type transcription factor | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G092517 | No alias | LOB domain-containing protein 13 | 0.03 | Orthogroups_2024-Update | |
| Glyma.06G178900 | No alias | Lateral organ boundaries (LOB) domain family protein | 0.05 | Orthogroups_2024-Update | |
| Glyma.13G349700 | No alias | LOB domain-containing protein 22 | 0.02 | Orthogroups_2024-Update | |
| Glyma.17G086300 | No alias | Lateral organ boundaries (LOB) domain family protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.18G024400 | No alias | Lateral organ boundaries (LOB) domain family protein | 0.04 | Orthogroups_2024-Update | |
| HORVU4Hr1G002480.2 | No alias | AS2/LOB-type transcription factor | 0.03 | Orthogroups_2024-Update | |
| HORVU4Hr1G013630.8 | No alias | AS2/LOB-type transcription factor | 0.04 | Orthogroups_2024-Update | |
| HORVU4Hr1G084750.2 | No alias | AS2/LOB-type transcription factor | 0.02 | Orthogroups_2024-Update | |
| MA_55357g0010 | No alias | (at1g07900 : 140.0) LOB domain-containing protein 1... | 0.03 | Orthogroups_2024-Update | |
| MA_9839150g0010 | No alias | (at1g07900 : 148.0) LOB domain-containing protein 1... | 0.03 | Orthogroups_2024-Update | |
| PSME_00022332-RA | No alias | (at2g40470 : 197.0) LOB domain-containing protein 15... | 0.03 | Orthogroups_2024-Update | |
| PSME_00048913-RA | No alias | (at2g28500 : 129.0) LOB domain-containing protein 11... | 0.03 | Orthogroups_2024-Update | |
| Potri.018G052700 | No alias | LOB domain-containing protein 22 | 0.03 | Orthogroups_2024-Update | |
| Pp1s73_7V6 | No alias | lob domain-containing | 0.02 | Orthogroups_2024-Update | |
| Seita.3G045800.1 | No alias | AS2/LOB-type transcription factor | 0.03 | Orthogroups_2024-Update | |
| Seita.9G443300.1 | No alias | AS2/LOB-type transcription factor | 0.04 | Orthogroups_2024-Update | |
| Sobic.001G409200.1 | No alias | AS2/LOB-type transcription factor | 0.03 | Orthogroups_2024-Update | |
| Solyc01g044520 | No alias | LOB domain-containing protein, putative (AHRD V3.3 ***... | 0.02 | Orthogroups_2024-Update | |
| Sopen03g015500 | No alias | Protein of unknown function DUF260 | 0.04 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005787 | signal peptidase complex | IEP | Predicted GO |
| BP | GO:0006465 | signal peptide processing | IEP | Predicted GO |
| BP | GO:0016485 | protein processing | IEP | Predicted GO |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | Predicted GO |
| CC | GO:0044432 | endoplasmic reticulum part | IEP | Predicted GO |
| BP | GO:0051604 | protein maturation | IEP | Predicted GO |
| CC | GO:1905368 | peptidase complex | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004883 | LOB | 45 | 142 |
| No external refs found! |