1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.D02509.1

Brara.D02509.1


Description : solute transporter *(AAAP)


Gene families : OG_42_0000219 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000219_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.D02509.1
Cluster HCAA Clusters: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
80911 No alias Transmembrane amino acid transporter family protein 0.04 Orthogroups_2024-Update
GRMZM2G097802 No alias Transmembrane amino acid transporter family protein 0.02 Orthogroups_2024-Update
GRMZM2G134888 No alias Transmembrane amino acid transporter family protein 0.03 Orthogroups_2024-Update
Seita.1G346700.1 No alias solute transporter *(AAAP) 0.03 Orthogroups_2024-Update
Sobic.004G001000.1 No alias solute transporter *(AAAP) 0.03 Orthogroups_2024-Update
Sopen10g034270 No alias Transmembrane amino acid transporter protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0005672 transcription factor TFIIA complex IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
MF GO:1901981 phosphatidylinositol phosphate binding IEP Predicted GO
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 147 526
No external refs found!