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  5. Brara.D02550.1

Brara.D02550.1


Description : regulatory factor *(TZF) of mRNA stress granule formation


Gene families : OG_42_0002653 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002653_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.D02550.1
Cluster HCAA Clusters: Cluster_230

Target Alias Description ECC score Gene Family Method Actions
Sopen10g029760 No alias Ankyrin repeats (3 copies) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
MF GO:0046872 metal ion binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
BP GO:0071586 CAAX-box protein processing IEP Predicted GO
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 285 305
IPR002110 Ankyrin_rpt 72 146
No external refs found!