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  5. Brara.E00559.1

Brara.E00559.1


Description : transcription factor *(CLAUSA)


Gene families : OG_42_0000021 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.E00559.1
Cluster HCAA Clusters: Cluster_342

Target Alias Description ECC score Gene Family Method Actions
442062 No alias myb-like HTH transcriptional regulator family protein 0.04 Orthogroups_2024-Update
A4A49_12162 No alias protein phosphate starvation response 1 0.02 Orthogroups_2024-Update
A4A49_37728 No alias protein phosphate starvation response 1 0.02 Orthogroups_2024-Update
Bradi3g36710 No alias Homeodomain-like superfamily protein 0.05 Orthogroups_2024-Update
Brara.A00897.1 No alias KANADI-type transcription factor 0.04 Orthogroups_2024-Update
Brara.J02547.1 No alias GARP subgroup PHL transcription factor 0.04 Orthogroups_2024-Update
Glyma.07G153900 No alias myb-like HTH transcriptional regulator family protein 0.03 Orthogroups_2024-Update
Glyma.09G017400 No alias myb-like HTH transcriptional regulator family protein 0.03 Orthogroups_2024-Update
Glyma.19G247600 No alias Homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
HORVU7Hr1G070420.7 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU7Hr1G109130.1 No alias GARP subgroup PHL transcription factor & regulatory... 0.05 Orthogroups_2024-Update
LOC_Os06g45890 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os09g12770 No alias Myb-like DNA-binding domain containing protein,... 0.02 Orthogroups_2024-Update
LOC_Os11g01480 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
MA_1432g0010 No alias (at3g13040 : 86.3) myb-like HTH transcriptional... 0.04 Orthogroups_2024-Update
Potri.001G133400 No alias Homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
Potri.005G205900 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.015G031600 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Pp1s137_199V6 No alias No description available 0.04 Orthogroups_2024-Update
Pp1s490_9V6 No alias myb-cc type transfactor 0.03 Orthogroups_2024-Update
Pp1s68_248V6 No alias myb transcription factor 0.03 Orthogroups_2024-Update
Pp1s74_161V6 No alias transfactor-like protein 0.03 Orthogroups_2024-Update
Seita.1G021500.1 No alias transcription factor *(CLAUSA) 0.03 Orthogroups_2024-Update
Seita.6G053400.1 No alias KANADI-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.004G106300.1 No alias transcription factor *(CLAUSA) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP Predicted GO
CC GO:0005787 signal peptidase complex IEP Predicted GO
BP GO:0006465 signal peptide processing IEP Predicted GO
MF GO:0008131 primary amine oxidase activity IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
CC GO:1905368 peptidase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 82 132
No external refs found!