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  5. Brara.E00580.1

Brara.E00580.1


Description : Unknown function


Gene families : OG_42_0004516 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004516_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.E00580.1
Cluster HCAA Clusters: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
At2g40000 No alias Nematode resistance protein-like HSPRO2... 0.07 Orthogroups_2024-Update
GRMZM2G003682 No alias ortholog of sugar beet HS1 PRO-1 2 0.03 Orthogroups_2024-Update
Glyma.02G255400 No alias ortholog of sugar beet HS1 PRO-1 2 0.03 Orthogroups_2024-Update
Glyma.14G061200 No alias ortholog of sugar beet HS1 PRO-1 2 0.03 Orthogroups_2024-Update
MA_10429454g0010 No alias (at3g55840 : 265.0) Hs1pro-1 protein; CONTAINS InterPro... 0.05 Orthogroups_2024-Update
MA_98236g0010 No alias (at2g40000 : 241.0) ortholog of sugar beet HS1 PRO-1 2... 0.03 Orthogroups_2024-Update
Pp1s120_74V6 No alias contains ESTs AU056303(S20457),AU056302(S20457) [Oryza... 0.05 Orthogroups_2024-Update
Pp1s28_254V6 No alias contains ESTs AU056303(S20457),AU056302(S20457) [Oryza... 0.02 Orthogroups_2024-Update
Pp1s38_76V6 No alias contains ESTs AU056303(S20457),AU056302(S20457) [Oryza... 0.03 Orthogroups_2024-Update
Seita.5G387000.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Sobic.003G361100.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006952 defense response IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006771 riboflavin metabolic process IEP Predicted GO
BP GO:0006914 autophagy IEP Predicted GO
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009231 riboflavin biosynthetic process IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042726 flavin-containing compound metabolic process IEP Predicted GO
BP GO:0042727 flavin-containing compound biosynthetic process IEP Predicted GO
BP GO:0061919 process utilizing autophagic mechanism IEP Predicted GO
InterPro domains Description Start Stop
IPR009743 Hs1pro-1_C 164 416
IPR009869 HSPRO1_N 127 161
IPR009869 HSPRO1_N 1 127
No external refs found!