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  5. Brara.E01223.1

Brara.E01223.1


Description : BBX class-IV transcription factor


Gene families : OG_42_0004508 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004508_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.E01223.1
Cluster HCAA Clusters: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
271535 No alias light-regulated zinc finger protein 1 0.02 Orthogroups_2024-Update
At1g06040 No alias B-box zinc finger protein 24... 0.05 Orthogroups_2024-Update
At2g31380 No alias B-box zinc finger protein 25... 0.06 Orthogroups_2024-Update
Glyma.15G029500 No alias B-box zinc finger family protein 0.04 Orthogroups_2024-Update
LOC_Os02g39360 No alias B-box zinc finger family protein, putative, expressed 0.02 Orthogroups_2024-Update
Seita.1G225000.1 No alias BBX class-IV transcription factor 0.03 Orthogroups_2024-Update
Solyc06g073180 No alias CONSTANS interacting protein 1 0.03 Orthogroups_2024-Update
Sopen06g029550 No alias B-box zinc finger 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006771 riboflavin metabolic process IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009231 riboflavin biosynthetic process IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
BP GO:0016052 carbohydrate catabolic process IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042726 flavin-containing compound metabolic process IEP Predicted GO
BP GO:0042727 flavin-containing compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000315 Znf_B-box 4 44
IPR000315 Znf_B-box 55 95
No external refs found!