Description : Unknown function
Gene families : OG_42_0007972 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007972_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brassica rapa: Brara.E01472.1 | |
Cluster | HCAA Clusters: Cluster_179 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Sopen12g005870 | No alias | TAF RNA Polymerase I subunit A | 0.04 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000120 | RNA polymerase I transcription factor complex | IEA | 16Dec |
BP | GO:0006360 | transcription by RNA polymerase I | IEA | 16Dec |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | Predicted GO |
MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
MF | GO:0003723 | RNA binding | IEP | Predicted GO |
CC | GO:0005732 | small nucleolar ribonucleoprotein complex | IEP | Predicted GO |
BP | GO:0006396 | RNA processing | IEP | Predicted GO |
BP | GO:0006520 | cellular amino acid metabolic process | IEP | Predicted GO |
BP | GO:0006553 | lysine metabolic process | IEP | Predicted GO |
BP | GO:0006766 | vitamin metabolic process | IEP | Predicted GO |
BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | Predicted GO |
BP | GO:0006771 | riboflavin metabolic process | IEP | Predicted GO |
MF | GO:0008173 | RNA methyltransferase activity | IEP | Predicted GO |
MF | GO:0008270 | zinc ion binding | IEP | Predicted GO |
MF | GO:0008686 | 3,4-dihydroxy-2-butanone-4-phosphate synthase activity | IEP | Predicted GO |
MF | GO:0008839 | 4-hydroxy-tetrahydrodipicolinate reductase | IEP | Predicted GO |
BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | Predicted GO |
BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | Predicted GO |
BP | GO:0009085 | lysine biosynthetic process | IEP | Predicted GO |
BP | GO:0009089 | lysine biosynthetic process via diaminopimelate | IEP | Predicted GO |
BP | GO:0009110 | vitamin biosynthetic process | IEP | Predicted GO |
BP | GO:0009231 | riboflavin biosynthetic process | IEP | Predicted GO |
MF | GO:0016628 | oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | IEP | Predicted GO |
MF | GO:0017076 | purine nucleotide binding | IEP | Predicted GO |
MF | GO:0032553 | ribonucleotide binding | IEP | Predicted GO |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Predicted GO |
CC | GO:0034457 | Mpp10 complex | IEP | Predicted GO |
BP | GO:0034660 | ncRNA metabolic process | IEP | Predicted GO |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Predicted GO |
BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | Predicted GO |
BP | GO:0042726 | flavin-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0042727 | flavin-containing compound biosynthetic process | IEP | Predicted GO |
MF | GO:0043167 | ion binding | IEP | Predicted GO |
MF | GO:0043169 | cation binding | IEP | Predicted GO |
BP | GO:0043648 | dicarboxylic acid metabolic process | IEP | Predicted GO |
BP | GO:0044283 | small molecule biosynthetic process | IEP | Predicted GO |
BP | GO:0046451 | diaminopimelate metabolic process | IEP | Predicted GO |
MF | GO:0046914 | transition metal ion binding | IEP | Predicted GO |
MF | GO:0097159 | organic cyclic compound binding | IEP | Predicted GO |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Predicted GO |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Predicted GO |
MF | GO:1901363 | heterocyclic compound binding | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR039495 | TAF1A-like | 73 | 586 |
No external refs found! |