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Description : Unknown function
Gene families : OG_42_0009599 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009599_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa: Brara.E01802.1 | |
| Cluster | HCAA Clusters: Cluster_265 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | 16Dec |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Predicted GO |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Predicted GO |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Predicted GO |
| BP | GO:0000966 | RNA 5'-end processing | IEP | Predicted GO |
| BP | GO:0001682 | tRNA 5'-leader removal | IEP | Predicted GO |
| MF | GO:0001871 | pattern binding | IEP | Predicted GO |
| MF | GO:0003723 | RNA binding | IEP | Predicted GO |
| MF | GO:0005048 | signal sequence binding | IEP | Predicted GO |
| CC | GO:0005643 | nuclear pore | IEP | Predicted GO |
| CC | GO:0005667 | transcription factor complex | IEP | Predicted GO |
| CC | GO:0005681 | spliceosomal complex | IEP | Predicted GO |
| CC | GO:0005786 | signal recognition particle, endoplasmic reticulum targeting | IEP | Predicted GO |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0006396 | RNA processing | IEP | Predicted GO |
| BP | GO:0006397 | mRNA processing | IEP | Predicted GO |
| BP | GO:0006605 | protein targeting | IEP | Predicted GO |
| BP | GO:0006612 | protein targeting to membrane | IEP | Predicted GO |
| BP | GO:0006613 | cotranslational protein targeting to membrane | IEP | Predicted GO |
| BP | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | IEP | Predicted GO |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Predicted GO |
| BP | GO:0008033 | tRNA processing | IEP | Predicted GO |
| MF | GO:0008312 | 7S RNA binding | IEP | Predicted GO |
| BP | GO:0008380 | RNA splicing | IEP | Predicted GO |
| BP | GO:0016070 | RNA metabolic process | IEP | Predicted GO |
| BP | GO:0016071 | mRNA metabolic process | IEP | Predicted GO |
| MF | GO:0017056 | structural constituent of nuclear pore | IEP | Predicted GO |
| MF | GO:0030246 | carbohydrate binding | IEP | Predicted GO |
| MF | GO:0030247 | polysaccharide binding | IEP | Predicted GO |
| CC | GO:0030677 | ribonuclease P complex | IEP | Predicted GO |
| MF | GO:0030942 | endoplasmic reticulum signal peptide binding | IEP | Predicted GO |
| CC | GO:0031011 | Ino80 complex | IEP | Predicted GO |
| BP | GO:0031123 | RNA 3'-end processing | IEP | Predicted GO |
| BP | GO:0031124 | mRNA 3'-end processing | IEP | Predicted GO |
| CC | GO:0032991 | protein-containing complex | IEP | Predicted GO |
| CC | GO:0033202 | DNA helicase complex | IEP | Predicted GO |
| MF | GO:0033218 | amide binding | IEP | Predicted GO |
| BP | GO:0033365 | protein localization to organelle | IEP | Predicted GO |
| BP | GO:0034471 | ncRNA 5'-end processing | IEP | Predicted GO |
| MF | GO:0042277 | peptide binding | IEP | Predicted GO |
| CC | GO:0044422 | organelle part | IEP | Predicted GO |
| CC | GO:0044428 | nuclear part | IEP | Predicted GO |
| CC | GO:0044446 | intracellular organelle part | IEP | Predicted GO |
| CC | GO:0044454 | nuclear chromosome part | IEP | Predicted GO |
| BP | GO:0045047 | protein targeting to ER | IEP | Predicted GO |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Predicted GO |
| CC | GO:0048500 | signal recognition particle | IEP | Predicted GO |
| MF | GO:0061630 | ubiquitin protein ligase activity | IEP | Predicted GO |
| MF | GO:0061659 | ubiquitin-like protein ligase activity | IEP | Predicted GO |
| CC | GO:0070603 | SWI/SNF superfamily-type complex | IEP | Predicted GO |
| BP | GO:0070972 | protein localization to endoplasmic reticulum | IEP | Predicted GO |
| BP | GO:0072594 | establishment of protein localization to organelle | IEP | Predicted GO |
| BP | GO:0072599 | establishment of protein localization to endoplasmic reticulum | IEP | Predicted GO |
| BP | GO:0072657 | protein localization to membrane | IEP | Predicted GO |
| BP | GO:0090150 | establishment of protein localization to membrane | IEP | Predicted GO |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Predicted GO |
| CC | GO:0097346 | INO80-type complex | IEP | Predicted GO |
| BP | GO:0099116 | tRNA 5'-end processing | IEP | Predicted GO |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Predicted GO |
| CC | GO:1902494 | catalytic complex | IEP | Predicted GO |
| CC | GO:1902555 | endoribonuclease complex | IEP | Predicted GO |
| CC | GO:1904949 | ATPase complex | IEP | Predicted GO |
| CC | GO:1905348 | endonuclease complex | IEP | Predicted GO |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR032867 | DYW_dom | 21 | 120 |
| No external refs found! |