Description : regulatory protein *(TAM) involved in metaphase to anaphase transition & regulatory protein *(CYCA) of cell cycle
Gene families : OG_42_0000120 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000120_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brassica rapa: Brara.E01867.1 | |
Cluster | HCAA Clusters: Cluster_38 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
230742 | No alias | CYCLIN B2;4 | 0.12 | Orthogroups_2024-Update | |
97411 | No alias | Cyclin A1;1 | 0.08 | Orthogroups_2024-Update | |
A4A49_12698 | No alias | cyclin-a1-3 | 0.07 | Orthogroups_2024-Update | |
A4A49_20167 | No alias | cyclin-b2-4 | 0.03 | Orthogroups_2024-Update | |
A4A49_35953 | No alias | g2mitotic-specific cyclin s13-6 | 0.13 | Orthogroups_2024-Update | |
A4A49_40931 | No alias | g2mitotic-specific cyclin s13-6 | 0.06 | Orthogroups_2024-Update | |
At1g20590 | No alias | Cyclin-B2-5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LM91] | 0.09 | Orthogroups_2024-Update | |
At1g34460 | No alias | CYCLIN B1;5 [Source:TAIR;Acc:AT1G34460] | 0.04 | Orthogroups_2024-Update | |
At1g44110 | No alias | CYCA1 [Source:UniProtKB/TrEMBL;Acc:A0A178W0H5] | 0.09 | Orthogroups_2024-Update | |
At1g47230 | No alias | Cyclin-A3-4 [Source:UniProtKB/Swiss-Prot;Acc:Q3ECW2] | 0.04 | Orthogroups_2024-Update | |
At1g76310 | No alias | CYCLIN B2;4 [Source:TAIR;Acc:AT1G76310] | 0.07 | Orthogroups_2024-Update | |
At2g17620 | No alias | Cyclin-B2-1 [Source:UniProtKB/Swiss-Prot;Acc:Q39068] | 0.05 | Orthogroups_2024-Update | |
At2g26760 | No alias | CYCB1 [Source:UniProtKB/TrEMBL;Acc:A0A178VPU5] | 0.06 | Orthogroups_2024-Update | |
At3g11520 | No alias | Cyclin-B1-3 [Source:UniProtKB/Swiss-Prot;Acc:Q39069] | 0.05 | Orthogroups_2024-Update | |
At4g35620 | No alias | Cyclin-B2-2 [Source:UniProtKB/Swiss-Prot;Acc:Q39070] | 0.09 | Orthogroups_2024-Update | |
At4g37490 | No alias | Cyclin-B1-1 [Source:UniProtKB/Swiss-Prot;Acc:P30183] | 0.1 | Orthogroups_2024-Update | |
Cre03.g207900 | No alias | Cyclin A2;4 | 0.01 | Orthogroups_2024-Update | |
Cre08.g370401 | No alias | CYCLIN B2;4 | 0.01 | Orthogroups_2024-Update | |
Glyma.01G159700 | No alias | Cyclin B2;3 | 0.11 | Orthogroups_2024-Update | |
Glyma.02G277600 | No alias | Cyclin family protein | 0.15 | Orthogroups_2024-Update | |
Glyma.03G123600 | No alias | Cyclin family protein | 0.16 | Orthogroups_2024-Update | |
Glyma.04G001100 | No alias | Cyclin B2;3 | 0.13 | Orthogroups_2024-Update | |
Glyma.04G043600 | No alias | Cyclin A3;1 | 0.04 | Orthogroups_2024-Update | |
Glyma.04G071600 | No alias | mitotic-like cyclin 3B from Arabidopsis | 0.04 | Orthogroups_2024-Update | |
Glyma.04G246600 | No alias | Cyclin A1;1 | 0.06 | Orthogroups_2024-Update | |
Glyma.06G000600 | No alias | Cyclin B2;3 | 0.1 | Orthogroups_2024-Update | |
Glyma.06G043900 | No alias | CYCLIN A3;4 | 0.09 | Orthogroups_2024-Update | |
Glyma.06G072900 | No alias | mitotic-like cyclin 3B from Arabidopsis | 0.04 | Orthogroups_2024-Update | |
Glyma.06G116100 | No alias | Cyclin A1;1 | 0.12 | Orthogroups_2024-Update | |
Glyma.07G034100 | No alias | Cyclin A2;4 | 0.1 | Orthogroups_2024-Update | |
Glyma.08G234900 | No alias | cyclin b3;1 | 0.08 | Orthogroups_2024-Update | |
Glyma.11G084500 | No alias | Cyclin B2;3 | 0.04 | Orthogroups_2024-Update | |
Glyma.13G031500 | No alias | Cyclin A1;1 | 0.08 | Orthogroups_2024-Update | |
Glyma.14G037100 | No alias | Cyclin family protein | 0.14 | Orthogroups_2024-Update | |
Glyma.14G154200 | No alias | Cyclin A1;1 | 0.05 | Orthogroups_2024-Update | |
Glyma.19G127200 | No alias | Cyclin family protein | 0.17 | Orthogroups_2024-Update | |
Kfl00112_0070 | kfl00112_0070_v1.... | (at1g80370 : 326.0) Cyclin A2;4 (CYCA2;4); CONTAINS... | 0.02 | Orthogroups_2024-Update | |
Kfl00560_0010 | kfl00560_0010_v1.1 | (at1g76310 : 298.0) core cell cycle genes; CYCLIN B2;4... | 0.06 | Orthogroups_2024-Update | |
MA_28323g0010 | No alias | (at5g11300 : 355.0) mitotic-like cyclin, core cell cycle... | 0.07 | Orthogroups_2024-Update | |
MA_6619g0010 | No alias | (at1g44110 : 409.0) Cyclin A1;1 (CYCA1;1); CONTAINS... | 0.07 | Orthogroups_2024-Update | |
MA_88982g0010 | No alias | (at5g11300 : 380.0) mitotic-like cyclin, core cell cycle... | 0.03 | Orthogroups_2024-Update | |
Mp2g25500.1 | No alias | cyclin (CYCA) | 0.02 | Orthogroups_2024-Update | |
Mp5g10030.1 | No alias | cyclin (CYCB) | 0.06 | Orthogroups_2024-Update | |
PSME_00001614-RA | No alias | (p34800|ccn1_antma : 345.0) G2/mitotic-specific cyclin-1... | 0.02 | Orthogroups_2024-Update | |
PSME_00031546-RA | No alias | (at1g44110 : 410.0) Cyclin A1;1 (CYCA1;1); CONTAINS... | 0.05 | Orthogroups_2024-Update | |
Potri.001G272000 | No alias | Cyclin B1;4 | 0.04 | Orthogroups_2024-Update | |
Potri.002G010000 | No alias | CYCLIN B2;4 | 0.07 | Orthogroups_2024-Update | |
Potri.005G181400 | No alias | Cyclin A1;1 | 0.04 | Orthogroups_2024-Update | |
Potri.006G035200 | No alias | Cyclin family protein | 0.05 | Orthogroups_2024-Update | |
Potri.016G033000 | No alias | Cyclin family protein | 0.03 | Orthogroups_2024-Update | |
Pp1s271_10V6 | No alias | ccb15_orysj ame: full=cyclin-b1-5 ame: full=g2... | 0.03 | Orthogroups_2024-Update | |
Pp1s84_31V6 | No alias | n-terminal domain containing expressed | 0.02 | Orthogroups_2024-Update | |
Solyc01g009040 | No alias | cyclinB1_4 | 0.2 | Orthogroups_2024-Update | |
Solyc02g082820 | No alias | cyclin B2 | 0.15 | Orthogroups_2024-Update | |
Solyc03g032190 | No alias | cyclinB2_7 | 0.24 | Orthogroups_2024-Update | |
Solyc04g078310 | No alias | cyclin A3_1 | 0.02 | Orthogroups_2024-Update | |
Solyc04g082430 | No alias | cyclinB2_4 | 0.19 | Orthogroups_2024-Update | |
Solyc06g065680 | No alias | cyclin A2 | 0.03 | Orthogroups_2024-Update | |
Solyc07g066660 | No alias | cyclinB3_1 | 0.18 | Orthogroups_2024-Update | |
Solyc10g078330 | No alias | B-type cyclin | 0.19 | Orthogroups_2024-Update | |
Solyc10g080950 | No alias | cyclinB1_2 | 0.24 | Orthogroups_2024-Update | |
Solyc11g005090 | No alias | cyclin A1 | 0.11 | Orthogroups_2024-Update | |
Solyc12g088470 | No alias | cyclin A3_4 | 0.03 | Orthogroups_2024-Update | |
Sopen01g004530 | No alias | Cyclin, N-terminal domain | 0.21 | Orthogroups_2024-Update | |
Sopen02g027620 | No alias | Cyclin, N-terminal domain | 0.05 | Orthogroups_2024-Update | |
Sopen03g006030 | No alias | Cyclin, N-terminal domain | 0.13 | Orthogroups_2024-Update | |
Sopen03g039320 | No alias | Cyclin, N-terminal domain | 0.03 | Orthogroups_2024-Update | |
Sopen04g036020 | No alias | Cyclin, N-terminal domain | 0.21 | Orthogroups_2024-Update | |
Sopen10g028990 | No alias | Cyclin, N-terminal domain | 0.08 | Orthogroups_2024-Update | |
Sopen10g031460 | No alias | Cyclin, N-terminal domain | 0.16 | Orthogroups_2024-Update | |
evm.model.contig_554.3 | No alias | (q40671|ccnb2_orysa : 240.0) G2/mitotic-specific... | 0.06 | Orthogroups_2024-Update | |
evm.model.tig00000076.67 | No alias | (at1g44110 : 156.0) Cyclin A1;1 (CYCA1;1); CONTAINS... | 0.02 | Orthogroups_2024-Update | |
evm.model.tig00000769.38 | No alias | (at1g76310 : 252.0) core cell cycle genes; CYCLIN B2;4... | 0.04 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | Predicted GO |
MF | GO:0003774 | motor activity | IEP | Predicted GO |
MF | GO:0003777 | microtubule motor activity | IEP | Predicted GO |
MF | GO:0003824 | catalytic activity | IEP | Predicted GO |
MF | GO:0003916 | DNA topoisomerase activity | IEP | Predicted GO |
MF | GO:0003918 | DNA topoisomerase type II (ATP-hydrolyzing) activity | IEP | Predicted GO |
MF | GO:0004650 | polygalacturonase activity | IEP | Predicted GO |
MF | GO:0005515 | protein binding | IEP | Predicted GO |
MF | GO:0005524 | ATP binding | IEP | Predicted GO |
BP | GO:0006265 | DNA topological change | IEP | Predicted GO |
BP | GO:0006405 | RNA export from nucleus | IEP | Predicted GO |
BP | GO:0006406 | mRNA export from nucleus | IEP | Predicted GO |
BP | GO:0006553 | lysine metabolic process | IEP | Predicted GO |
BP | GO:0006694 | steroid biosynthetic process | IEP | Predicted GO |
BP | GO:0006928 | movement of cell or subcellular component | IEP | Predicted GO |
BP | GO:0007017 | microtubule-based process | IEP | Predicted GO |
BP | GO:0007018 | microtubule-based movement | IEP | Predicted GO |
MF | GO:0008017 | microtubule binding | IEP | Predicted GO |
MF | GO:0008092 | cytoskeletal protein binding | IEP | Predicted GO |
MF | GO:0008094 | DNA-dependent ATPase activity | IEP | Predicted GO |
MF | GO:0008144 | drug binding | IEP | Predicted GO |
BP | GO:0008202 | steroid metabolic process | IEP | Predicted GO |
CC | GO:0008541 | proteasome regulatory particle, lid subcomplex | IEP | Predicted GO |
MF | GO:0008837 | diaminopimelate epimerase activity | IEP | Predicted GO |
MF | GO:0009055 | electron transfer activity | IEP | Predicted GO |
BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | Predicted GO |
BP | GO:0009085 | lysine biosynthetic process | IEP | Predicted GO |
BP | GO:0009089 | lysine biosynthetic process via diaminopimelate | IEP | Predicted GO |
BP | GO:0009987 | cellular process | IEP | Predicted GO |
MF | GO:0015631 | tubulin binding | IEP | Predicted GO |
MF | GO:0016462 | pyrophosphatase activity | IEP | Predicted GO |
MF | GO:0016787 | hydrolase activity | IEP | Predicted GO |
MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Predicted GO |
MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Predicted GO |
MF | GO:0016854 | racemase and epimerase activity | IEP | Predicted GO |
MF | GO:0016855 | racemase and epimerase activity, acting on amino acids and derivatives | IEP | Predicted GO |
MF | GO:0017076 | purine nucleotide binding | IEP | Predicted GO |
MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Predicted GO |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Predicted GO |
MF | GO:0032553 | ribonucleotide binding | IEP | Predicted GO |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Predicted GO |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Predicted GO |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Predicted GO |
MF | GO:0036094 | small molecule binding | IEP | Predicted GO |
MF | GO:0036361 | racemase activity, acting on amino acids and derivatives | IEP | Predicted GO |
MF | GO:0042623 | ATPase activity, coupled | IEP | Predicted GO |
MF | GO:0043167 | ion binding | IEP | Predicted GO |
MF | GO:0043168 | anion binding | IEP | Predicted GO |
BP | GO:0043248 | proteasome assembly | IEP | Predicted GO |
BP | GO:0043648 | dicarboxylic acid metabolic process | IEP | Predicted GO |
CC | GO:0045261 | proton-transporting ATP synthase complex, catalytic core F(1) | IEP | Predicted GO |
BP | GO:0046451 | diaminopimelate metabolic process | IEP | Predicted GO |
MF | GO:0046933 | proton-transporting ATP synthase activity, rotational mechanism | IEP | Predicted GO |
MF | GO:0047661 | amino-acid racemase activity | IEP | Predicted GO |
BP | GO:0050657 | nucleic acid transport | IEP | Predicted GO |
BP | GO:0050658 | RNA transport | IEP | Predicted GO |
BP | GO:0051028 | mRNA transport | IEP | Predicted GO |
BP | GO:0051168 | nuclear export | IEP | Predicted GO |
BP | GO:0051236 | establishment of RNA localization | IEP | Predicted GO |
MF | GO:0061505 | DNA topoisomerase II activity | IEP | Predicted GO |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Predicted GO |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Predicted GO |
No external refs found! |