Description : RNA editing factor *(MORF)
Gene families : OG_42_0000510 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000510_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brassica rapa: Brara.E02636.1 | |
Cluster | HCAA Clusters: Cluster_62 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_31672 | No alias | multiple organellar rna editing factor 3, mitochondrial | 0.03 | Orthogroups_2024-Update | |
At4g20020 | No alias | Multiple organellar RNA editing factor 1, mitochondrial... | 0.03 | Orthogroups_2024-Update | |
Bradi3g14650 | No alias | plastid developmental protein DAG, putative | 0.05 | Orthogroups_2024-Update | |
Bradi5g20660 | No alias | differentiation and greening-like 1 | 0.05 | Orthogroups_2024-Update | |
Brara.E00914.1 | No alias | RNA editing factor *(MORF) | 0.03 | Orthogroups_2024-Update | |
GRMZM2G383540 | No alias | plastid developmental protein DAG, putative | 0.03 | Orthogroups_2024-Update | |
GRMZM5G808811 | No alias | differentiation and greening-like 1 | 0.03 | Orthogroups_2024-Update | |
Glyma.13G271400 | No alias | cobalt ion binding | 0.05 | Orthogroups_2024-Update | |
HORVU2Hr1G101720.2 | No alias | RNA editing factor *(MORF) | 0.02 | Orthogroups_2024-Update | |
HORVU5Hr1G072190.4 | No alias | RNA editing factor *(MORF) | 0.03 | Orthogroups_2024-Update | |
HORVU7Hr1G073170.2 | No alias | RNA editing factor *(MORF) | 0.03 | Orthogroups_2024-Update | |
LOC_Os08g04450 | No alias | DAG protein, chloroplast precursor, putative, expressed | 0.03 | Orthogroups_2024-Update | |
Potri.001G393400 | No alias | cobalt ion binding | 0.03 | Orthogroups_2024-Update | |
Sobic.006G204100.1 | No alias | RNA editing factor *(MORF) | 0.03 | Orthogroups_2024-Update | |
Solyc02g079210 | No alias | DAG protein (AHRD V3.3 *** B6SJX7_MAIZE) | 0.04 | Orthogroups_2024-Update | |
Solyc05g054960 | No alias | Peroxisome biogenesis protein 12 (AHRD V3.3 *** K4C2H2_SOLLC) | 0.03 | Orthogroups_2024-Update | |
Solyc12g014230 | No alias | DAG protein (AHRD V3.3 *** A0A0K9PW98_ZOSMR) | 0.03 | Orthogroups_2024-Update | |
Sopen05g033420 | No alias | hypothetical protein | 0.03 | Orthogroups_2024-Update | |
Sopen10g003300 | No alias | hypothetical protein | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | Predicted GO |
CC | GO:0000178 | exosome (RNase complex) | IEP | Predicted GO |
BP | GO:0000462 | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | IEP | Predicted GO |
MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
MF | GO:0003723 | RNA binding | IEP | Predicted GO |
MF | GO:0003924 | GTPase activity | IEP | Predicted GO |
MF | GO:0004478 | methionine adenosyltransferase activity | IEP | Predicted GO |
MF | GO:0004645 | phosphorylase activity | IEP | Predicted GO |
CC | GO:0005634 | nucleus | IEP | Predicted GO |
CC | GO:0005694 | chromosome | IEP | Predicted GO |
CC | GO:0005730 | nucleolus | IEP | Predicted GO |
CC | GO:0005732 | small nucleolar ribonucleoprotein complex | IEP | Predicted GO |
BP | GO:0006364 | rRNA processing | IEP | Predicted GO |
BP | GO:0006396 | RNA processing | IEP | Predicted GO |
BP | GO:0006556 | S-adenosylmethionine biosynthetic process | IEP | Predicted GO |
BP | GO:0006694 | steroid biosynthetic process | IEP | Predicted GO |
MF | GO:0008184 | glycogen phosphorylase activity | IEP | Predicted GO |
BP | GO:0008202 | steroid metabolic process | IEP | Predicted GO |
MF | GO:0015098 | molybdate ion transmembrane transporter activity | IEP | Predicted GO |
BP | GO:0015689 | molybdate ion transport | IEP | Predicted GO |
BP | GO:0016072 | rRNA metabolic process | IEP | Predicted GO |
MF | GO:0017076 | purine nucleotide binding | IEP | Predicted GO |
BP | GO:0030490 | maturation of SSU-rRNA | IEP | Predicted GO |
MF | GO:0030599 | pectinesterase activity | IEP | Predicted GO |
CC | GO:0030684 | preribosome | IEP | Predicted GO |
CC | GO:0030686 | 90S preribosome | IEP | Predicted GO |
CC | GO:0030688 | preribosome, small subunit precursor | IEP | Predicted GO |
MF | GO:0032553 | ribonucleotide binding | IEP | Predicted GO |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Predicted GO |
CC | GO:0034457 | Mpp10 complex | IEP | Predicted GO |
BP | GO:0034470 | ncRNA processing | IEP | Predicted GO |
BP | GO:0034660 | ncRNA metabolic process | IEP | Predicted GO |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Predicted GO |
BP | GO:0042545 | cell wall modification | IEP | Predicted GO |
CC | GO:0042575 | DNA polymerase complex | IEP | Predicted GO |
MF | GO:0043021 | ribonucleoprotein complex binding | IEP | Predicted GO |
MF | GO:0043022 | ribosome binding | IEP | Predicted GO |
CC | GO:0043227 | membrane-bounded organelle | IEP | Predicted GO |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Predicted GO |
CC | GO:0043625 | delta DNA polymerase complex | IEP | Predicted GO |
CC | GO:0044428 | nuclear part | IEP | Predicted GO |
CC | GO:0044452 | nucleolar part | IEP | Predicted GO |
CC | GO:0044454 | nuclear chromosome part | IEP | Predicted GO |
MF | GO:0044877 | protein-containing complex binding | IEP | Predicted GO |
BP | GO:0046500 | S-adenosylmethionine metabolic process | IEP | Predicted GO |
CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | Predicted GO |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Predicted GO |
MF | GO:0097159 | organic cyclic compound binding | IEP | Predicted GO |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Predicted GO |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Predicted GO |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Predicted GO |
MF | GO:1901363 | heterocyclic compound binding | IEP | Predicted GO |
CC | GO:1905354 | exoribonuclease complex | IEP | Predicted GO |
No InterPro domains available for this sequence
No external refs found! |