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  5. Brara.E02801.1

Brara.E02801.1


Description : subfamily ABCC transporter


Gene families : OG_42_0000076 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000076_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.E02801.1
Cluster HCAA Clusters: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
At3g62700 No alias ABC transporter C family member 14... 0.03 Orthogroups_2024-Update
Brara.K00933.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.18G079700 No alias multidrug resistance-associated protein 3 0.04 Orthogroups_2024-Update
LOC_Os04g49900 No alias ABC transporter family protein, putative, expressed 0.03 Orthogroups_2024-Update
Potri.010G055200 No alias multidrug resistance-associated protein 3 0.04 Orthogroups_2024-Update
Potri.014G130500 No alias multidrug resistance-associated protein 4 0.02 Orthogroups_2024-Update
Seita.7G039900.1 No alias subfamily ABCC transporter 0.05 Orthogroups_2024-Update
Solyc03g007530 No alias ABC transporter family protein (AHRD V3.3 *** U5FPJ5_POPTR) 0.03 Orthogroups_2024-Update
Solyc09g075020 No alias Multidrug resistance protein ABC transporter family... 0.03 Orthogroups_2024-Update
Sopen01g030860 No alias ABC transporter transmembrane region 0.03 Orthogroups_2024-Update
Sopen01g032440 No alias ABC transporter transmembrane region 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Predicted GO
CC GO:0000151 ubiquitin ligase complex IEP Predicted GO
CC GO:0000152 nuclear ubiquitin ligase complex IEP Predicted GO
BP GO:0001932 regulation of protein phosphorylation IEP Predicted GO
CC GO:0005680 anaphase-promoting complex IEP Predicted GO
BP GO:0009605 response to external stimulus IEP Predicted GO
BP GO:0009606 tropism IEP Predicted GO
BP GO:0010274 hydrotropism IEP Predicted GO
BP GO:0010498 proteasomal protein catabolic process IEP Predicted GO
BP GO:0019220 regulation of phosphate metabolic process IEP Predicted GO
MF GO:0019900 kinase binding IEP Predicted GO
MF GO:0019901 protein kinase binding IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
BP GO:0031145 anaphase-promoting complex-dependent catabolic process IEP Predicted GO
BP GO:0031399 regulation of protein modification process IEP Predicted GO
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Predicted GO
BP GO:0032268 regulation of cellular protein metabolic process IEP Predicted GO
BP GO:0042325 regulation of phosphorylation IEP Predicted GO
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0043549 regulation of kinase activity IEP Predicted GO
BP GO:0045859 regulation of protein kinase activity IEP Predicted GO
BP GO:0050790 regulation of catalytic activity IEP Predicted GO
BP GO:0051174 regulation of phosphorus metabolic process IEP Predicted GO
BP GO:0051246 regulation of protein metabolic process IEP Predicted GO
BP GO:0051338 regulation of transferase activity IEP Predicted GO
BP GO:0051726 regulation of cell cycle IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
BP GO:0065009 regulation of molecular function IEP Predicted GO
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Predicted GO
MF GO:0097602 cullin family protein binding IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 909 1149
IPR011527 ABC1_TM_dom 293 559
IPR003439 ABC_transporter-like 1242 1390
IPR003439 ABC_transporter-like 624 758
No external refs found!