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  5. Brara.E03554.1

Brara.E03554.1


Description : voltage-gated potassium cation channel *(AKT/SKOR/GORK)


Gene families : OG_42_0000182 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000182_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.E03554.1
Cluster HCAA Clusters: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
A4A49_31719 No alias potassium channel kat1 0.03 Orthogroups_2024-Update
LOC_Os01g11250 No alias potassium channel KAT1, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00047867-RA No alias (at3g02850 : 954.0) Encodes SKOR, a member of Shaker... 0.03 Orthogroups_2024-Update
Potri.003G018800 No alias potassium transport 2/3 0.03 Orthogroups_2024-Update
Pp1s3_156V6 No alias potassium channel 0.02 Orthogroups_2024-Update
Seita.5G244400.1 No alias voltage-gated potassium cation channel *(AKT/SKOR/GORK) 0.03 Orthogroups_2024-Update
Sobic.003G300600.1 No alias voltage-gated potassium cation channel *(AKT/SKOR/GORK) 0.03 Orthogroups_2024-Update
Sobic.006G093400.1 No alias voltage-gated potassium cation channel *(AKT/SKOR/GORK) 0.03 Orthogroups_2024-Update
evm.model.contig_4491.8 No alias (at2g26650 : 132.0) Encodes AKT1, a member of the Shaker... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA 16Dec
MF GO:0005515 protein binding IEA 16Dec
BP GO:0006811 ion transport IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006771 riboflavin metabolic process IEP Predicted GO
BP GO:0006914 autophagy IEP Predicted GO
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009231 riboflavin biosynthetic process IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042726 flavin-containing compound metabolic process IEP Predicted GO
BP GO:0042727 flavin-containing compound biosynthetic process IEP Predicted GO
BP GO:0061919 process utilizing autophagic mechanism IEP Predicted GO
InterPro domains Description Start Stop
IPR000595 cNMP-bd_dom 424 508
IPR021789 KHA_dom 756 825
IPR005821 Ion_trans_dom 84 329
IPR002110 Ankyrin_rpt 654 731
IPR002110 Ankyrin_rpt 555 643
No external refs found!