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  5. Brara.E03559.1

Brara.E03559.1


Description : atypical PTP phosphatase *(PFA-DSP)


Gene families : OG_42_0001262 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001262_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.E03559.1
Cluster HCAA Clusters: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
A4A49_04436 No alias putative tyrosine-protein phosphatase 0.02 Orthogroups_2024-Update
LOC_Os02g53160 No alias tyrosine phosphatase family protein, putative, expressed 0.03 Orthogroups_2024-Update
Sobic.002G142066.1 No alias atypical PTP phosphatase *(PFA-DSP) 0.02 Orthogroups_2024-Update
Sobic.004G312800.1 No alias atypical PTP phosphatase *(PFA-DSP) 0.03 Orthogroups_2024-Update
Sopen04g025240 No alias Tyrosine phosphatase family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Predicted GO
BP GO:0009250 glucan biosynthetic process IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
BP GO:0051273 beta-glucan metabolic process IEP Predicted GO
BP GO:0051274 beta-glucan biosynthetic process IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR004861 Siw14-like 15 163
No external refs found!