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Description : RING-H2-class CTL-subclass E3 ubiquitin ligase
Gene families : OG_42_0000181 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000181_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa: Brara.F00132.1 | |
| Cluster | HCAA Clusters: Cluster_112 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 89607 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| A4A49_05648 | No alias | putative e3 ubiquitin-protein ligase hip1 | 0.03 | Orthogroups_2024-Update | |
| A4A49_14077 | No alias | putative e3 ubiquitin-protein ligase rhg1a | 0.03 | Orthogroups_2024-Update | |
| At1g17970 | No alias | At1g17970/F2H15_16 [Source:UniProtKB/TrEMBL;Acc:Q944L9] | 0.03 | Orthogroups_2024-Update | |
| At5g24870 | No alias | At5g24870 [Source:UniProtKB/TrEMBL;Acc:Q8L775] | 0.05 | Orthogroups_2024-Update | |
| Bradi5g20760 | No alias | RING/U-box superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Bradi5g24120 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Brara.E02634.1 | No alias | RING-H2-class CTL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Glyma.05G241900 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.07G214600 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| HORVU2Hr1G101370.5 | No alias | RING-H2-class CTL-subclass E3 ubiquitin ligase | 0.04 | Orthogroups_2024-Update | |
| LOC_Os05g47670 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.04 | Orthogroups_2024-Update | |
| Potri.001G304900 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Potri.001G373700 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Potri.006G274700 | No alias | RING/U-box superfamily protein | 0.05 | Orthogroups_2024-Update | |
| Potri.007G045500 | No alias | RING/U-box superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Potri.018G005600 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Seita.3G158100.1 | No alias | RING-H2-class CTL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| Seita.4G247100.1 | No alias | regulatory E3 ubiquitin ligase (MREL/JUL) of microtubule... | 0.04 | Orthogroups_2024-Update | |
| Seita.7G226600.1 | No alias | RING-H2-class CTL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| Solyc03g118840 | No alias | RING/U-box superfamily protein (AHRD V3.3 *** AT1G73760.1) | 0.02 | Orthogroups_2024-Update | |
| Solyc12g096420 | No alias | RING/U-box superfamily protein (AHRD V3.3 *** AT5G10650.2) | 0.04 | Orthogroups_2024-Update | |
| Sopen05g004600 | No alias | Ring finger domain | 0.03 | Orthogroups_2024-Update | |
| Sopen10g003040 | No alias | Ring finger domain | 0.03 | Orthogroups_2024-Update | |
| Sopen12g028810 | No alias | Ring finger domain | 0.03 | Orthogroups_2024-Update | |
| Sopen12g032260 | No alias | Ring finger domain | 0.04 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004089 | carbonate dehydratase activity | IEP | Predicted GO |
| MF | GO:0004853 | uroporphyrinogen decarboxylase activity | IEP | Predicted GO |
| BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | Predicted GO |
| MF | GO:0008270 | zinc ion binding | IEP | Predicted GO |
| MF | GO:0008289 | lipid binding | IEP | Predicted GO |
| CC | GO:0009522 | photosystem I | IEP | Predicted GO |
| MF | GO:0016829 | lyase activity | IEP | Predicted GO |
| MF | GO:0016831 | carboxy-lyase activity | IEP | Predicted GO |
| BP | GO:0017006 | protein-tetrapyrrole linkage | IEP | Predicted GO |
| BP | GO:0017007 | protein-bilin linkage | IEP | Predicted GO |
| BP | GO:0017009 | protein-phycocyanobilin linkage | IEP | Predicted GO |
| BP | GO:0033013 | tetrapyrrole metabolic process | IEP | Predicted GO |
| BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | Predicted GO |
| MF | GO:0043169 | cation binding | IEP | Predicted GO |
| MF | GO:0046872 | metal ion binding | IEP | Predicted GO |
| MF | GO:0046914 | transition metal ion binding | IEP | Predicted GO |
| MF | GO:0061630 | ubiquitin protein ligase activity | IEP | Predicted GO |
| MF | GO:0061659 | ubiquitin-like protein ligase activity | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 409 | 450 |
| No external refs found! |