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  5. Brara.F00205.1

Brara.F00205.1


Description : component *(PsaH) of PS-I complex


Gene families : OG_42_0004367 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004367_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.F00205.1
Cluster HCAA Clusters: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
A4A49_26930 No alias photosystem i reaction center subunit vi, chloroplastic 0.07 Orthogroups_2024-Update
A4A49_56724 No alias photosystem i reaction center subunit vi, chloroplastic 0.05 Orthogroups_2024-Update
At1g52230 No alias Photosystem I reaction center subunit VI-2,... 0.06 Orthogroups_2024-Update
Bradi2g16810 No alias photosystem I subunit H2 0.05 Orthogroups_2024-Update
Cre07.g330250 No alias photosystem I subunit H-1 0.06 Orthogroups_2024-Update
Glyma.07G019700 No alias photosystem I subunit H2 0.07 Orthogroups_2024-Update
Glyma.08G204800 No alias photosystem I subunit H2 0.05 Orthogroups_2024-Update
Glyma.13G357300 No alias photosystem I subunit H2 0.06 Orthogroups_2024-Update
Glyma.15G016300 No alias photosystem I subunit H2 0.03 Orthogroups_2024-Update
HORVU0Hr1G001490.2 No alias component *(PsaH) of PS-I complex 0.07 Orthogroups_2024-Update
Kfl00269_0020 kfl00269_0020_v1.1 (at1g52230 : 106.0) photosystem I subunit H2 (PSAH2);... 0.04 Orthogroups_2024-Update
MA_65259g0010 No alias (p20143|psah_horvu : 147.0) Photosystem I reaction... 0.04 Orthogroups_2024-Update
Mp7g13220.1 No alias component PsaH of PS-I complex 0.05 Orthogroups_2024-Update
PSME_00050341-RA No alias (o65101|psah_maize : 148.0) Photosystem I reaction... 0.03 Orthogroups_2024-Update
Pp1s206_11V6 No alias photosystem i reaction center subunit chloroplast 0.08 Orthogroups_2024-Update
Pp1s89_62V6 No alias photosystem i reaction center subunit chloroplast 0.08 Orthogroups_2024-Update
Seita.3G149000.1 No alias component *(PsaH) of PS-I complex 0.09 Orthogroups_2024-Update
Sobic.009G229700.1 No alias component *(PsaH) of PS-I complex 0.1 Orthogroups_2024-Update
Solyc03g120640 No alias Photosystem I reaction center subunit VI (AHRD V3.3 ***... 0.05 Orthogroups_2024-Update
Solyc06g066640 No alias Photosystem I reaction center subunit VI (AHRD V3.3 ***... 0.08 Orthogroups_2024-Update
Solyc12g044280 No alias Photosystem I reaction center subunit VI (AHRD V3.3 ***... 0.05 Orthogroups_2024-Update
Sopen00g011820 No alias Photosystem I reaction centre subunit VI 0.08 Orthogroups_2024-Update
Sopen06g024910 No alias Photosystem I reaction centre subunit VI 0.1 Orthogroups_2024-Update
Sopen12g022520 No alias Photosystem I reaction centre subunit VI 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0009522 photosystem I IEA 16Dec
CC GO:0009538 photosystem I reaction center IEA 16Dec
BP GO:0015979 photosynthesis IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0004356 glutamate-ammonia ligase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
CC GO:0005886 plasma membrane IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006090 pyruvate metabolic process IEP Predicted GO
BP GO:0006541 glutamine metabolic process IEP Predicted GO
BP GO:0006542 glutamine biosynthetic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006644 phospholipid metabolic process IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
BP GO:0008654 phospholipid biosynthetic process IEP Predicted GO
MF GO:0008883 glutamyl-tRNA reductase activity IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0009767 photosynthetic electron transport chain IEP Predicted GO
BP GO:0010109 regulation of photosynthesis IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
MF GO:0010242 oxygen evolving activity IEP Predicted GO
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016211 ammonia ligase activity IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Predicted GO
MF GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016851 magnesium chelatase activity IEP Predicted GO
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Predicted GO
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Predicted GO
CC GO:0034357 photosynthetic membrane IEP Predicted GO
BP GO:0042548 regulation of photosynthesis, light reaction IEP Predicted GO
BP GO:0042549 photosystem II stabilization IEP Predicted GO
CC GO:0042651 thylakoid membrane IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Predicted GO
BP GO:0046490 isopentenyl diphosphate metabolic process IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
BP GO:0050992 dimethylallyl diphosphate biosynthetic process IEP Predicted GO
BP GO:0050993 dimethylallyl diphosphate metabolic process IEP Predicted GO
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Predicted GO
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEP Predicted GO
BP GO:0071586 CAAX-box protein processing IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR004928 PSI_PsaH 7 145
No external refs found!