Brara.F00298.1

Description : subgroup ERF-VIII transcription factor

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.F00298.1
Cluster	HCAA Clusters: Cluster_105

Target	Alias	Description	ECC score	Gene Family Method
409196	No alias	related to AP2 11	0.02	Orthogroups_2024-Update
A4A49_23010	No alias	ethylene-responsive transcription factor 2	0.02	Orthogroups_2024-Update
A4A49_38622	No alias	dehydration-responsive element-binding protein 3	0.03	Orthogroups_2024-Update
A4A49_64911	No alias	ethylene-responsive transcription factor erf061	0.02	Orthogroups_2024-Update
AC209257.4_FG006	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
At1g22190	No alias	Ethylene-responsive transcription factor RAP2-13...	0.07	Orthogroups_2024-Update
At1g72360	No alias	Integrase-type DNA-binding superfamily protein...	0.03	Orthogroups_2024-Update
At3g25890	No alias	Ethylene-responsive transcription factor ERF119...	0.03	Orthogroups_2024-Update
At4g25480	No alias	Dehydration-responsive element-binding protein 1A...	0.03	Orthogroups_2024-Update
Bradi3g58980	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Bradi4g31040	No alias	related to AP2 2	0.03	Orthogroups_2024-Update
Bradi4g35580	No alias	C-repeat/DRE binding factor 1	0.03	Orthogroups_2024-Update
Brara.A03436.1	No alias	subgroup ERF-IV/DREB2 transcription factor	0.01	Orthogroups_2024-Update
Brara.B01950.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.03	Orthogroups_2024-Update
Brara.C01790.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Brara.I05089.1	No alias	subgroup ERF-VIII transcription factor	0.01	Orthogroups_2024-Update
Glyma.03G263700	No alias	related to AP2 12	0.03	Orthogroups_2024-Update
Glyma.04G062900	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Glyma.07G044300	No alias	related to AP2 12	0.03	Orthogroups_2024-Update
Glyma.08G216600	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.12G117000	No alias	erf domain protein 9	0.03	Orthogroups_2024-Update
Glyma.16G012600	No alias	related to AP2 2	0.03	Orthogroups_2024-Update
Glyma.20G197000	No alias	Integrase-type DNA-binding superfamily protein	0.05	Orthogroups_2024-Update
HORVU1Hr1G055710.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
LOC_Os03g08460	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os03g08500	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os06g07030	No alias	AP2 domain containing protein, expressed	0.04	Orthogroups_2024-Update
LOC_Os12g41060	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
MA_3405g0010	No alias	(q40476\|erf1_tobac : 120.0) Ethylene-responsive...	0.03	Orthogroups_2024-Update
MA_69434g0020	No alias	(q40479\|erf2_tobac : 84.0) Ethylene-responsive...	0.03	Orthogroups_2024-Update
MA_78784g0010	No alias	no hits & (original description: no original description)	0.05	Orthogroups_2024-Update
MA_9294379g0010	No alias	(at5g11590 : 120.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
MA_97319g0010	No alias	(at3g16280 : 127.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
PSME_00054258-RA	No alias	no hits & (original description: no original description)	0.01	Orthogroups_2024-Update
Potri.011G057000	No alias	erf domain protein 9	0.03	Orthogroups_2024-Update
Potri.018G038100	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.T050600	No alias	ethylene response factor 1	0.03	Orthogroups_2024-Update
Pp1s127_75V6	No alias	ap2 erf domain-containing transcription factor	0.03	Orthogroups_2024-Update
Seita.1G174100.1	No alias	subgroup ERF-X transcription factor	0.02	Orthogroups_2024-Update
Seita.7G262800.1	No alias	subgroup ERF-II-DEAR transcription factor	0.06	Orthogroups_2024-Update
Seita.9G516500.1	No alias	subgroup ERF-VII transcription factor	0.03	Orthogroups_2024-Update
Sobic.009G101400.1	No alias	subgroup ERF-IV/DREB2 transcription factor	0.02	Orthogroups_2024-Update
Sopen04g027740	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen05g030590	No alias	AP2 domain	0.04	Orthogroups_2024-Update
Sopen06g022520	No alias	AP2 domain	0.04	Orthogroups_2024-Update
Sopen07g024840	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen07g033090	No alias	AP2 domain	0.02	Orthogroups_2024-Update
Sopen09g032860	No alias	AP2 domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	16Dec
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000272	polysaccharide catabolic process	IEP	Predicted GO
MF	GO:0003873	6-phosphofructo-2-kinase activity	IEP	Predicted GO
MF	GO:0004806	triglyceride lipase activity	IEP	Predicted GO
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	Predicted GO
BP	GO:0005976	polysaccharide metabolic process	IEP	Predicted GO
BP	GO:0006000	fructose metabolic process	IEP	Predicted GO
BP	GO:0006357	regulation of transcription by RNA polymerase II	IEP	Predicted GO
MF	GO:0008443	phosphofructokinase activity	IEP	Predicted GO
BP	GO:0010215	cellulose microfibril organization	IEP	Predicted GO
MF	GO:0016160	amylase activity	IEP	Predicted GO
MF	GO:0016161	beta-amylase activity	IEP	Predicted GO
MF	GO:0016298	lipase activity	IEP	Predicted GO
BP	GO:0016567	protein ubiquitination	IEP	Predicted GO
CC	GO:0016592	mediator complex	IEP	Predicted GO
MF	GO:0019200	carbohydrate kinase activity	IEP	Predicted GO
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	Predicted GO
BP	GO:0030198	extracellular matrix organization	IEP	Predicted GO
BP	GO:0032446	protein modification by small protein conjugation	IEP	Predicted GO
BP	GO:0043062	extracellular structure organization	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	21	71

External Links

No external refs found!

Brara.F00298.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation