1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.F01566.1

Brara.F01566.1


Description : SMARCC component *(SWI3) of chromatin remodeling complex


Gene families : OG_42_0001732 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001732_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.F01566.1
Cluster HCAA Clusters: Cluster_332

Target Alias Description ECC score Gene Family Method Actions
Glyma.11G118900 No alias DNA-binding family protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0003714 transcription corepressor activity IEP Predicted GO
MF GO:0005337 nucleoside transmembrane transporter activity IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0015858 nucleoside transport IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
BP GO:1901264 carbohydrate derivative transport IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
BP GO:1901642 nucleoside transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR007526 SWIRM 174 260
IPR001005 SANT/Myb 391 433
IPR032451 SMARCC_C 561 636
No external refs found!