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  5. Brara.F01958.1

Brara.F01958.1


Description : regulatory protein *(BIC) of cryptochrome signalling


Gene families : OG_42_0003548 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003548_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.F01958.1
Cluster HCAA Clusters: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
A4A49_02207 No alias hypothetical protein 0.04 Orthogroups_2024-Update
A4A49_41521 No alias hypothetical protein 0.04 Orthogroups_2024-Update
At3g52740 No alias Protein BIC1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXJ1] 0.04 Orthogroups_2024-Update
Bradi5g09310 No alias Function unknown 0.03 Orthogroups_2024-Update
Brara.I03577.1 No alias regulatory protein *(BIC) of cryptochrome signalling 0.03 Orthogroups_2024-Update
Glyma.03G195300 No alias Function unknown 0.03 Orthogroups_2024-Update
Glyma.10G072000 No alias Function unknown 0.05 Orthogroups_2024-Update
Glyma.13G153400 No alias Function unknown 0.04 Orthogroups_2024-Update
Kfl00139_0340 kfl00139_0340_v1.1 no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
Pp1s74_133V6 No alias T22K7.130; expressed protein [Arabidopsis thaliana] 0.03 Orthogroups_2024-Update
Seita.7G090200.1 No alias regulatory protein *(BIC) of cryptochrome signalling 0.04 Orthogroups_2024-Update
Sobic.004G165500.1 No alias regulatory protein *(BIC) of cryptochrome signalling 0.05 Orthogroups_2024-Update
Sobic.006G068900.2 No alias regulatory protein *(BIC) of cryptochrome signalling 0.03 Orthogroups_2024-Update
Solyc09g009420 No alias LOW QUALITY:AMP-dependent synthetase and ligase family... 0.06 Orthogroups_2024-Update
Sopen09g004160 No alias hypothetical protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0004512 inositol-3-phosphate synthase activity IEP Predicted GO
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005886 plasma membrane IEP Predicted GO
BP GO:0006020 inositol metabolic process IEP Predicted GO
BP GO:0006021 inositol biosynthetic process IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006090 pyruvate metabolic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006644 phospholipid metabolic process IEP Predicted GO
BP GO:0006817 phosphate ion transport IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0008654 phospholipid biosynthetic process IEP Predicted GO
MF GO:0008883 glutamyl-tRNA reductase activity IEP Predicted GO
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009538 photosystem I reaction center IEP Predicted GO
BP GO:0009767 photosynthetic electron transport chain IEP Predicted GO
BP GO:0010109 regulation of photosynthesis IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
MF GO:0010242 oxygen evolving activity IEP Predicted GO
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Predicted GO
MF GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP Predicted GO
BP GO:0019637 organophosphate metabolic process IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Predicted GO
BP GO:0042548 regulation of photosynthesis, light reaction IEP Predicted GO
BP GO:0042549 photosystem II stabilization IEP Predicted GO
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
BP GO:0046165 alcohol biosynthetic process IEP Predicted GO
BP GO:0046173 polyol biosynthetic process IEP Predicted GO
BP GO:0046490 isopentenyl diphosphate metabolic process IEP Predicted GO
MF GO:0050661 NADP binding IEP Predicted GO
BP GO:0050992 dimethylallyl diphosphate biosynthetic process IEP Predicted GO
BP GO:0050993 dimethylallyl diphosphate metabolic process IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEP Predicted GO
BP GO:0090407 organophosphate biosynthetic process IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!