At2g20450

Description : 60S ribosomal protein L14-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIM4]

Gene families : OG_42_0002310 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002310_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Arabidopsis release: At2g20450
Cluster	HCCA clusters: Cluster_6

Target	Alias	Description	ECC score	Gene Family Method
403602	No alias	Ribosomal protein L14	0.06	Orthogroups_2024-Update
Bradi1g06366	No alias	Ribosomal protein L14	0.1	Orthogroups_2024-Update
Bradi5g15570	No alias	Ribosomal protein L14	0.08	Orthogroups_2024-Update
Brara.A01683.1	No alias	component *(eL14) of large ribosomal-subunit (LSU) proteome	0.12	Orthogroups_2024-Update
Brara.H01525.1	No alias	component *(eL14) of large ribosomal-subunit (LSU) proteome	0.12	Orthogroups_2024-Update
Brara.K00108.1	No alias	component *(eL14) of large ribosomal-subunit (LSU) proteome	0.09	Orthogroups_2024-Update
Cre17.g701200	No alias	Ribosomal protein L14	0.02	Orthogroups_2024-Update
GRMZM2G140116	No alias	Ribosomal protein L14	0.02	Orthogroups_2024-Update
GRMZM2G168330	No alias	Ribosomal protein L14	0.06	Orthogroups_2024-Update
Glyma.02G004100	No alias	Ribosomal protein L14	0.08	Orthogroups_2024-Update
Glyma.10G004300	No alias	Ribosomal protein L14	0.05	Orthogroups_2024-Update
Glyma.10G182500	No alias	Ribosomal protein L14	0.05	Orthogroups_2024-Update
Glyma.20G207500	No alias	Ribosomal protein L14	0.03	Orthogroups_2024-Update
HORVU6Hr1G058560.1	No alias	component *(eL14) of large ribosomal-subunit (LSU) proteome	0.05	Orthogroups_2024-Update
Kfl00487_0060	kfl00487_0060_v1.1	(p55844\|rl14_pea : 178.0) Probable 60 ribosomal protein...	0.03	Orthogroups_2024-Update
LOC_Os02g40880	No alias	ribosomal protein L14, putative, expressed	0.02	Orthogroups_2024-Update
MA_10434733g0010	No alias	(at4g27090 : 182.0) Ribosomal protein L14; FUNCTIONS IN:...	0.04	Orthogroups_2024-Update
Mp8g17070.1	No alias	component RPL14 of LSU proteome component	0.06	Orthogroups_2024-Update
PSME_00000258-RA	No alias	(at4g27090 : 212.0) Ribosomal protein L14; FUNCTIONS IN:...	0.06	Orthogroups_2024-Update
Potri.002G035700	No alias	Ribosomal protein L14	0.03	Orthogroups_2024-Update
Potri.005G227300	No alias	Ribosomal protein L14	0.05	Orthogroups_2024-Update
Pp1s101_10V6	No alias	60s ribosomal protein l14	0.05	Orthogroups_2024-Update
Pp1s334_38V6	No alias	60s ribosomal protein l14	0.1	Orthogroups_2024-Update
Pp1s83_247V6	No alias	60s ribosomal protein l14	0.11	Orthogroups_2024-Update
Seita.1G238800.1	No alias	component *(eL14) of large ribosomal-subunit (LSU) proteome	0.11	Orthogroups_2024-Update
Seita.7G166100.1	No alias	component *(eL14) of large ribosomal-subunit (LSU) proteome	0.12	Orthogroups_2024-Update
Sobic.002G286900.1	No alias	component *(eL14) of large ribosomal-subunit (LSU) proteome	0.1	Orthogroups_2024-Update
Sobic.006G147000.2	No alias	component *(eL14) of large ribosomal-subunit (LSU) proteome	0.13	Orthogroups_2024-Update
Solyc06g008260	No alias	60S ribosomal protein L14, putative (AHRD V3.3 *** B9SS61_RICCO)	0.06	Orthogroups_2024-Update
Solyc06g083820	No alias	60S ribosomal protein L14, putative (AHRD V3.3 *** B9SS61_RICCO)	0.08	Orthogroups_2024-Update
Solyc09g066430	No alias	60S ribosomal protein L14, putative (AHRD V3.3 *** B9SV21_RICCO)	0.11	Orthogroups_2024-Update
Sopen06g003120	No alias	Ribosomal protein L14	0.08	Orthogroups_2024-Update
Sopen06g035230	No alias	Ribosomal protein L14	0.04	Orthogroups_2024-Update
Sopen09g028150	No alias	Ribosomal protein L14	0.07	Orthogroups_2024-Update
evm.model.contig_3540.2	No alias	(at4g27090 : 117.0) Ribosomal protein L14; FUNCTIONS IN:...	0.11	Orthogroups_2024-Update
evm.model.tig00000194.50	No alias	(at4g27090 : 121.0) Ribosomal protein L14; FUNCTIONS IN:...	0.07	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	InterProScan predictions
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular	IEA	InterProScan predictions
CC	GO:0005840	ribosome	IEA	InterProScan predictions
BP	GO:0006412	translation	IEA	InterProScan predictions
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000049	tRNA binding	IEP	Predicted GO
BP	GO:0000105	histidine biosynthetic process	IEP	Predicted GO
BP	GO:0000154	rRNA modification	IEP	Predicted GO
BP	GO:0001510	RNA methylation	IEP	Predicted GO
BP	GO:0001522	pseudouridine synthesis	IEP	Predicted GO
MF	GO:0003723	RNA binding	IEP	Predicted GO
MF	GO:0003937	IMP cyclohydrolase activity	IEP	Predicted GO
MF	GO:0004488	methylenetetrahydrofolate dehydrogenase (NADP+) activity	IEP	Predicted GO
MF	GO:0004635	phosphoribosyl-AMP cyclohydrolase activity	IEP	Predicted GO
MF	GO:0004643	phosphoribosylaminoimidazolecarboxamide formyltransferase activity	IEP	Predicted GO
MF	GO:0004797	thymidine kinase activity	IEP	Predicted GO
CC	GO:0005852	eukaryotic translation initiation factor 3 complex	IEP	Predicted GO
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Predicted GO
BP	GO:0006270	DNA replication initiation	IEP	Predicted GO
BP	GO:0006364	rRNA processing	IEP	Predicted GO
BP	GO:0006396	RNA processing	IEP	Predicted GO
BP	GO:0006547	histidine metabolic process	IEP	Predicted GO
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	Predicted GO
MF	GO:0008097	5S rRNA binding	IEP	Predicted GO
MF	GO:0008168	methyltransferase activity	IEP	Predicted GO
MF	GO:0008649	rRNA methyltransferase activity	IEP	Predicted GO
BP	GO:0009451	RNA modification	IEP	Predicted GO
BP	GO:0016070	RNA metabolic process	IEP	Predicted GO
BP	GO:0016072	rRNA metabolic process	IEP	Predicted GO
MF	GO:0016435	rRNA (guanine) methyltransferase activity	IEP	Predicted GO
MF	GO:0016646	oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor	IEP	Predicted GO
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Predicted GO
MF	GO:0016742	hydroxymethyl-, formyl- and related transferase activity	IEP	Predicted GO
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	IEP	Predicted GO
MF	GO:0016814	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines	IEP	Predicted GO
MF	GO:0019136	deoxynucleoside kinase activity	IEP	Predicted GO
MF	GO:0019205	nucleobase-containing compound kinase activity	IEP	Predicted GO
MF	GO:0019206	nucleoside kinase activity	IEP	Predicted GO
MF	GO:0019238	cyclohydrolase activity	IEP	Predicted GO
MF	GO:0019843	rRNA binding	IEP	Predicted GO
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	Predicted GO
MF	GO:0030515	snoRNA binding	IEP	Predicted GO
CC	GO:0030684	preribosome	IEP	Predicted GO
BP	GO:0031167	rRNA methylation	IEP	Predicted GO
CC	GO:0032040	small-subunit processome	IEP	Predicted GO
BP	GO:0034470	ncRNA processing	IEP	Predicted GO
BP	GO:0034660	ncRNA metabolic process	IEP	Predicted GO
BP	GO:0036265	RNA (guanine-N7)-methylation	IEP	Predicted GO
BP	GO:0042254	ribosome biogenesis	IEP	Predicted GO
BP	GO:0044085	cellular component biogenesis	IEP	Predicted GO
BP	GO:0046483	heterocycle metabolic process	IEP	Predicted GO
BP	GO:0052803	imidazole-containing compound metabolic process	IEP	Predicted GO
BP	GO:0070475	rRNA base methylation	IEP	Predicted GO
BP	GO:0070476	rRNA (guanine-N7)-methylation	IEP	Predicted GO
BP	GO:0090304	nucleic acid metabolic process	IEP	Predicted GO
MF	GO:0140102	catalytic activity, acting on a rRNA	IEP	Predicted GO
BP	GO:1901360	organic cyclic compound metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002784	Ribosomal_L14e_dom	45	117

External Links

No external refs found!

At2g20450

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation