Brara.F02120.1

Description : NAC-type transcription factor

Gene families : OG_42_0000017 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.F02120.1
Cluster	HCAA Clusters: Cluster_64

Target	Alias	Description	ECC score	Gene Family Method
71404	No alias	NAC 007	0.03	Orthogroups_2024-Update
A4A49_25578	No alias	nac domain-containing protein 7	0.03	Orthogroups_2024-Update
At1g79580	No alias	Protein SOMBRERO [Source:UniProtKB/Swiss-Prot;Acc:Q9MA17]	0.03	Orthogroups_2024-Update
Brara.C00996.1	No alias	NAC-type transcription factor	0.04	Orthogroups_2024-Update
Glyma.01G167900	No alias	vascular related NAC-domain protein 1	0.04	Orthogroups_2024-Update
Glyma.05G055900	No alias	NAC 007	0.03	Orthogroups_2024-Update
Glyma.17G154100	No alias	NAC domain containing protein 71	0.03	Orthogroups_2024-Update
Glyma.18G043900	No alias	NAC domain containing protein 28	0.03	Orthogroups_2024-Update
MA_27968g0010	No alias	(at1g65910 : 231.0) NAC domain containing protein 28...	0.03	Orthogroups_2024-Update
PSME_00055994-RA	No alias	(at1g65910 : 249.0) NAC domain containing protein 28...	0.03	Orthogroups_2024-Update
Potri.005G058900	No alias	NAC domain containing protein 82	0.04	Orthogroups_2024-Update
Sobic.001G522700.2	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.006G107400.1	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
Solyc06g073050	No alias	NAC domain-containing protein	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	IEP	Predicted GO
CC	GO:0000159	protein phosphatase type 2A complex	IEP	Predicted GO
MF	GO:0004592	pantoate-beta-alanine ligase activity	IEP	Predicted GO
MF	GO:0005375	copper ion transmembrane transporter activity	IEP	Predicted GO
CC	GO:0005575	cellular_component	IEP	Predicted GO
CC	GO:0005667	transcription factor complex	IEP	Predicted GO
CC	GO:0005694	chromosome	IEP	Predicted GO
BP	GO:0006575	cellular modified amino acid metabolic process	IEP	Predicted GO
BP	GO:0006766	vitamin metabolic process	IEP	Predicted GO
BP	GO:0006767	water-soluble vitamin metabolic process	IEP	Predicted GO
BP	GO:0006825	copper ion transport	IEP	Predicted GO
CC	GO:0008287	protein serine/threonine phosphatase complex	IEP	Predicted GO
BP	GO:0009110	vitamin biosynthetic process	IEP	Predicted GO
CC	GO:0009523	photosystem II	IEP	Predicted GO
BP	GO:0015939	pantothenate metabolic process	IEP	Predicted GO
BP	GO:0015940	pantothenate biosynthetic process	IEP	Predicted GO
MF	GO:0016881	acid-amino acid ligase activity	IEP	Predicted GO
MF	GO:0019208	phosphatase regulator activity	IEP	Predicted GO
MF	GO:0019888	protein phosphatase regulator activity	IEP	Predicted GO
MF	GO:0030145	manganese ion binding	IEP	Predicted GO
BP	GO:0035434	copper ion transmembrane transport	IEP	Predicted GO
BP	GO:0042364	water-soluble vitamin biosynthetic process	IEP	Predicted GO
BP	GO:0042398	cellular modified amino acid biosynthetic process	IEP	Predicted GO
MF	GO:0046915	transition metal ion transmembrane transporter activity	IEP	Predicted GO
CC	GO:1903293	phosphatase complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	8	135

External Links

No external refs found!

Brara.F02120.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation