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  5. Brara.F02278.1

Brara.F02278.1


Description : E3 ubiquitin ligase *(RGLG) & E3 ubiquitin ligase *(RGLG)


Gene families : OG_42_0000469 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000469_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Brassica rapa: Brara.F02278.1
Cluster HCAA Clusters: Cluster_233

Target Alias Description ECC score Gene Family Method Actions
At1g67800 No alias Copine (Calcium-dependent phospholipid-binding protein)... 0.06 Orthogroups_2024-Update
GRMZM2G477113 No alias RING domain ligase1 0.02 Orthogroups_2024-Update
Glyma.04G211000 No alias Copine (Calcium-dependent phospholipid-binding protein) family 0.04 Orthogroups_2024-Update
Glyma.19G078600 No alias RING domain ligase1 0.03 Orthogroups_2024-Update
MA_462034g0010 No alias (at1g79380 : 112.0) Ca(2)-dependent phospholipid-binding... 0.03 Orthogroups_2024-Update
PSME_00002049-RA No alias (at5g14420 : 474.0) RING domain ligase2 (RGLG2);... 0.04 Orthogroups_2024-Update
PSME_00032354-RA No alias (at5g14420 : 438.0) RING domain ligase2 (RGLG2);... 0.04 Orthogroups_2024-Update
Sobic.010G188400.1 No alias E3 ubiquitin ligase *(RGLG) & E3 ubiquitin ligase *(RGLG) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Predicted GO
CC GO:0005787 signal peptidase complex IEP Predicted GO
BP GO:0006465 signal peptide processing IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
CC GO:1905368 peptidase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR010734 Copine 60 272
No external refs found!