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Description : EC_3.2 glycosylase
Gene families : OG_42_0000259 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000259_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa: Brara.F02946.1 | |
| Cluster | HCAA Clusters: Cluster_162 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| At3g16850 | No alias | Pectin lyase-like superfamily protein... | 0.03 | Orthogroups_2024-Update | |
| Seita.4G004900.1 | No alias | EC_3.2 glycosylase | 0.03 | Orthogroups_2024-Update | |
| Solyc01g094970 | No alias | Pectin lyase-like superfamily protein (AHRD V3.3 *** AT3G61490.4) | 0.02 | Orthogroups_2024-Update | |
| Solyc06g009790 | No alias | Pectin lyase-like superfamily protein (AHRD V3.3 ***... | 0.02 | Orthogroups_2024-Update | |
| Solyc08g082170 | No alias | Pectin lyase-like superfamily protein (AHRD V3.3 ***... | 0.04 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004650 | polygalacturonase activity | IEA | 16Dec |
| BP | GO:0005975 | carbohydrate metabolic process | IEA | 16Dec |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000123 | histone acetyltransferase complex | IEP | Predicted GO |
| MF | GO:0003684 | damaged DNA binding | IEP | Predicted GO |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | Predicted GO |
| MF | GO:0003918 | DNA topoisomerase type II (ATP-hydrolyzing) activity | IEP | Predicted GO |
| MF | GO:0004402 | histone acetyltransferase activity | IEP | Predicted GO |
| BP | GO:0006265 | DNA topological change | IEP | Predicted GO |
| BP | GO:0006289 | nucleotide-excision repair | IEP | Predicted GO |
| BP | GO:0006473 | protein acetylation | IEP | Predicted GO |
| BP | GO:0006475 | internal protein amino acid acetylation | IEP | Predicted GO |
| MF | GO:0008080 | N-acetyltransferase activity | IEP | Predicted GO |
| MF | GO:0008094 | DNA-dependent ATPase activity | IEP | Predicted GO |
| BP | GO:0010498 | proteasomal protein catabolic process | IEP | Predicted GO |
| MF | GO:0016407 | acetyltransferase activity | IEP | Predicted GO |
| MF | GO:0016410 | N-acyltransferase activity | IEP | Predicted GO |
| BP | GO:0016573 | histone acetylation | IEP | Predicted GO |
| MF | GO:0016670 | oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor | IEP | Predicted GO |
| MF | GO:0016972 | thiol oxidase activity | IEP | Predicted GO |
| BP | GO:0018393 | internal peptidyl-lysine acetylation | IEP | Predicted GO |
| BP | GO:0018394 | peptidyl-lysine acetylation | IEP | Predicted GO |
| BP | GO:0030163 | protein catabolic process | IEP | Predicted GO |
| CC | GO:0031248 | protein acetyltransferase complex | IEP | Predicted GO |
| MF | GO:0034212 | peptide N-acetyltransferase activity | IEP | Predicted GO |
| BP | GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process | IEP | Predicted GO |
| BP | GO:0043543 | protein acylation | IEP | Predicted GO |
| MF | GO:0061505 | DNA topoisomerase II activity | IEP | Predicted GO |
| MF | GO:0061733 | peptide-lysine-N-acetyltransferase activity | IEP | Predicted GO |
| CC | GO:0070461 | SAGA-type complex | IEP | Predicted GO |
| CC | GO:1902493 | acetyltransferase complex | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000743 | Glyco_hydro_28 | 139 | 422 |
| No external refs found! |