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  5. Brara.F03500.1

Brara.F03500.1


Description : Unknown function


Gene families : OG_42_0000314 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000314_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.F03500.1
Cluster HCAA Clusters: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
At3g26510 No alias Octicosapeptide/Phox/Bem1p family protein... 0.04 Orthogroups_2024-Update
Glyma.07G097900 No alias Octicosapeptide/Phox/Bem1p family protein 0.03 Orthogroups_2024-Update
Glyma.10G270200 No alias Octicosapeptide/Phox/Bem1p family protein 0.03 Orthogroups_2024-Update
MA_36205g0010 No alias (at2g01190 : 192.0) Octicosapeptide/Phox/Bem1p family... 0.03 Orthogroups_2024-Update
MA_68697g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Seita.8G111900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen02g024160 No alias PB1 domain 0.03 Orthogroups_2024-Update
Sopen05g004590 No alias PB1 domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006771 riboflavin metabolic process IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009231 riboflavin biosynthetic process IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042726 flavin-containing compound metabolic process IEP Predicted GO
BP GO:0042727 flavin-containing compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000270 PB1_dom 79 169
No external refs found!