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  5. Brara.G00307.1

Brara.G00307.1


Description : Unknown function


Gene families : OG_42_0000110 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000110_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.G00307.1
Cluster HCAA Clusters: Cluster_290

Target Alias Description ECC score Gene Family Method Actions
Potri.012G009566 No alias receptor like protein 34 0.03 Orthogroups_2024-Update
Seita.6G199300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.003G059100.2 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc01g005720 No alias Leucine-rich repeat receptor-like protein kinase family... 0.03 Orthogroups_2024-Update
Solyc12g049190 No alias Leucine-rich repeat receptor-like protein kinase family... 0.03 Orthogroups_2024-Update
Sopen01g001770 No alias Leucine Rich repeats (2 copies) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000278 mitotic cell cycle IEP Predicted GO
CC GO:0000775 chromosome, centromeric region IEP Predicted GO
CC GO:0005750 mitochondrial respiratory chain complex III IEP Predicted GO
CC GO:0005778 peroxisomal membrane IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
BP GO:0006643 membrane lipid metabolic process IEP Predicted GO
BP GO:0006664 glycolipid metabolic process IEP Predicted GO
BP GO:0007031 peroxisome organization IEP Predicted GO
BP GO:0007049 cell cycle IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0009247 glycolipid biosynthetic process IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
CC GO:0031903 microbody membrane IEP Predicted GO
MF GO:0035673 oligopeptide transmembrane transporter activity IEP Predicted GO
CC GO:0042579 microbody IEP Predicted GO
MF GO:0042887 amide transmembrane transporter activity IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044438 microbody part IEP Predicted GO
CC GO:0044439 peroxisomal part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044455 mitochondrial membrane part IEP Predicted GO
CC GO:0045275 respiratory chain complex III IEP Predicted GO
BP GO:0046467 membrane lipid biosynthetic process IEP Predicted GO
CC GO:0070069 cytochrome complex IEP Predicted GO
CC GO:0070469 respiratory chain IEP Predicted GO
BP GO:0072488 ammonium transmembrane transport IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
CC GO:0098687 chromosomal region IEP Predicted GO
CC GO:0098800 inner mitochondrial membrane protein complex IEP Predicted GO
CC GO:0098803 respiratory chain complex IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
BP GO:1903509 liposaccharide metabolic process IEP Predicted GO
MF GO:1904680 peptide transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 30 73
IPR001611 Leu-rich_rpt 852 910
IPR001611 Leu-rich_rpt 689 747
IPR001611 Leu-rich_rpt 301 360
IPR001611 Leu-rich_rpt 545 603
IPR001611 Leu-rich_rpt 664 685
No external refs found!